fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046633 not found in 350aa AT5G61430.1 1st_1st 0.618479880 Ia
Pt026888 not found in 359aa AT5G61430.1 1st_1st 0.625931445 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G61430.1     METFCGFQKE-EEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPW
pt026888_POPTR_ MENISGLGKEGDDQMDLPPGFRFHPTDEELISHYLYKKVLDITFSAKAIGDVDLNKSEPW
gm046633_Glyma1 MENVPVVCKE-DDQMDLPPGFRFHPTDEELISHYLYKKVIDTKFCARAIGEVDLNKSEPW
                **..  . ** ::******************:***:***:* .*.*:***:*********

AT5G61430.1     ELPWMAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTL
pt026888_POPTR_ ELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKFLVGMKKTL
gm046633_Glyma1 DLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTL
                :*** ******************************************:*** ********

AT5G61430.1     VFYRGRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPISSLI
pt026888_POPTR_ VFYKGRAPKGGKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHISGLV
gm046633_Glyma1 VFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHISGIM
                ***:****** *:**************.********************:.***  **.::

AT5G61430.1     RIGSLGTDFNPSLLPSLTDSSPYNDKTK--TEPVYVPCFSNQTD--QNQGTTLNCFSSPV
pt026888_POPTR_ RLGSFSNEFSPSGLPPLMDSSPYNCKIKPVAESAYVPCFSNPINVQRNQQDTIDSFDNHL
gm046633_Glyma1 RLDSFADELGSSALPPLSDSSPSIGNTKPLNDTAYVPCFSNPIDVQRNQEGVFDSFTNSI
                *:.*:. ::..* **.* ****   : *   :..*******  :  :**  .::.* . :

AT5G61430.1     L--NSIQADIFHRIPL----YQTQSLQVSMNLQSP--VL-TQEHSVLHAMIENNR----R
pt026888_POPTR_ LAFSTNPLEVFPRIPLLNPFYTPQAVPVSGNLQYPGSVL-MQDHSILRALIANQGTNMKQ
gm046633_Glyma1 YAVSSNPMGILPRMPPSGSFYSTQGVQAAPNLAFPGSVYTLQDHTILRTLCENNG-----
                   .:    :: *:*     * .*.: .: **  *  *   *:*::*:::  *:      

AT5G61430.1     QSLK----TMSVSQETGVSTDMNTD---ISSDFEFGKRRFDSQEDP-SSSTGPVDLEPFW
pt026888_POPTR_ QSFKIERDMVGVSQDS--TTDMNTEIYSVISNLEVGKRSGDDQDATPSTLVASTDLDSFW
gm046633_Glyma1 --YKPERDMISVSQETGLTTDINAE---TSSNFDMGRRPFENHNHA-SVSVAPLDLDGLW
                   *     :.***::  :**:*::     *:::.*:*  :.:: . *  ... **: :*

AT5G61430.1     NY
pt026888_POPTR_ NY
gm046633_Glyma1 NY
                **
BoxShade v3.31 C (beta, 970507) Output
AT5G61430.1     M E T F C G F Q K E - E E Q M D L P P G F R F H P T D E E L I T H Y L H K K V L D T S F S A K A I G E V D L N K S E P W
pt026888_POPTR_    M E N I S G L G K E G D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V L D I T F S A K A I G D V D L N K S E P W
gm046633_Glyma1    M E N V P V V C K E - D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V I D T K F C A R A I G E V D L N K S E P W
 
AT5G61430.1     E L P W M A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I Y R G K S L V G M K K T L
pt026888_POPTR_    E L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I Y R G K F L V G M K K T L
gm046633_Glyma1    D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F R G K S L V G M K K T L
 
AT5G61430.1     V F Y R G R A P K G Q K T N W V M H E Y R L E G K F S A H N L P K T A K N E W V I C R V F Q K S A G G K K I P I S S L I
pt026888_POPTR_    V F Y K G R A P K G G K T N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K K T H I S G L V
gm046633_Glyma1    V F Y R G R A P K G E K S N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K K T H I S G I M
 
AT5G61430.1     R I G S L G T D F N P S L L P S L T D S S P Y N D K T K - - T E P V Y V P C F S N Q T D - - Q N Q G T T L N C F S S P V
pt026888_POPTR_    R L G S F S N E F S P S G L P P L M D S S P Y N C K I K P V A E S A Y V P C F S N P I N V Q R N Q Q D T I D S F D N H L
gm046633_Glyma1    R L D S F A D E L G S S A L P P L S D S S P S I G N T K P L N D T A Y V P C F S N P I D V Q R N Q E G V F D S F T N S I
 
AT5G61430.1     L - - N S I Q A D I F H R I P L - - - - Y Q T Q S L Q V S M N L Q S P - - V L - T Q E H S V L H A M I E N N R - - - - R
pt026888_POPTR_    L A F S T N P L E V F P R I P L L N P F Y T P Q A V P V S G N L Q Y P G S V L - M Q D H S I L R A L I A N Q G T N M K Q
gm046633_Glyma1    Y A V S S N P M G I L P R M P P S G S F Y S T Q G V Q A A P N L A F P G S V Y T L Q D H T I L R T L C E N N G - - - - -
 
AT5G61430.1     Q S L K - - - - T M S V S Q E T G V S T D M N T D - - - I S S D F E F G K R R F D S Q E D P - S S S T G P V D L E P F W
pt026888_POPTR_    Q S F K I E R D M V G V S Q D S - - T T D M N T E I Y S V I S N L E V G K R S G D D Q D A T P S T L V A S T D L D S F W
gm046633_Glyma1    - - Y K P E R D M I S V S Q E T G L T T D I N A E - - - T S S N F D M G R R P F E N H N H A - S V S V A P L D L D G L W
 
AT5G61430.1     N Y
pt026888_POPTR_    N Y
gm046633_Glyma1    N Y
 
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