fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027426 not found in 220aa AT5G61590.1 1st_1st 0.393939393 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G61590.1     METFEESSDLDVIQKHLFEDLMIPDGFIEDFVFDDTAFVSGLWSLEPFNPVPKLE-PSSP
gm027426_Glyma1 MTTAEKTSNLDLIRQHLFG---------ENIISDSSSFVSNLHH----HPV-KLEPPSSP
                * * *::*:**:*::***          *::: *.::***.*      :** *** ****

AT5G61590.1     VLDPDSYVQEILQMEAESSS--------------------SSSTTT--------------
gm027426_Glyma1 EFDFTSYI-----LDNNTSSNFFTFLEGYDLVADMKFVIDSDNTTTMVIPSKEVIKKCNI
                 :*  **:     :: ::**                    *..***              

AT5G61590.1     -SPE--------VETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGT
gm027426_Glyma1 NSPEEQPMVSSSSEEKPTMKKSEHYDEAKRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGT
                 ***         *  .. **:::::*:::*******************::**:*:****

AT5G61590.1     FESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYD-APVNSCRKRRRTD--------VPQ
gm027426_Glyma1 FDSEIDAAKAYDCAAFKMRGQKAILNFPLEAGESDPKPNNSCGRKRRRDQNHDHEFELP-
                *:*:****:*** ****:**:**:*****:**: *  * *** ::** *        :* 

AT5G61590.1     PQGTTTSTSSSSSN
gm027426_Glyma1 --------------
BoxShade v3.31 C (beta, 970507) Output
AT5G61590.1     M E T F E E S S D L D V I Q K H L F E D L M I P D G F I E D F V F D D T A F V S G L W S L E P F N P V P K L E - P S S P
gm027426_Glyma1    M T T A E K T S N L D L I R Q H L F G - - - - - - - - - E N I I S D S S S F V S N L H H - - - - H P V - K L E P P S S P
 
AT5G61590.1     V L D P D S Y V Q E I L Q M E A E S S S - - - - - - - - - - - - - - - - - - - - S S S T T T - - - - - - - - - - - - - -
gm027426_Glyma1    E F D F T S Y I - - - - - L D N N T S S N F F T F L E G Y D L V A D M K F V I D S D N T T T M V I P S K E V I K K C N I
 
AT5G61590.1     - S P E - - - - - - - - V E T V S N R K K T K R F E E T R H Y R G V R R R P W G K F A A E I R D P A K K G S R I W L G T
gm027426_Glyma1    N S P E E Q P M V S S S S E E K P T M K K S E H Y D E A K R Y R G V R R R P W G K F A A E I R D P T R K G T R V W L G T
 
AT5G61590.1     F E S D I D A A R A Y D Y A A F K L R G R K A V L N F P L D A G K Y D - A P V N S C R K R R R T D - - - - - - - - V P Q
gm027426_Glyma1    F D S E I D A A K A Y D C A A F K M R G Q K A I L N F P L E A G E S D P K P N N S C G R K R R R D Q N H D H E F E L P -
 
AT5G61590.1     P Q G T T T S T S S S S S N
gm027426_Glyma1    - - - - - - - - - - - - - -
 
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