fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053963 not found in 266aa AT5G61600.1 1st_1st 0.383458646 Ib
Pt009948 not found in 288aa AT5G51190.1 1st_not 0.403508771 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G61600.1     MATKQEALAIDFISQHLLTDFVSME------------------TDHPSLFTNQLHNFHSE
gm053963_Glyma2 MQSSISQSEI-CITDYLLPQEVPSQ---FQFPDM---SNNNIPMNHTNLQMPQITSF---
pt009948_POPTR_ MASFDEASALELIREHLLTDFASMDSLITNLDDLCSTSSSCITTDYIKTESTEFDPFNQS
                * :  .   :  * ::**.: .. :                   :: .    ::  *   

AT5G61600.1     TGPR----------TITNQSPKPNSTLNQRKP--------PLP---NLS--VSRTVSTKT
gm053963_Glyma2 --------------SKP---PRSSSNLSNRKPSL-RNITIPSI-TSGLTTTMSQTTTTTT
pt009948_POPTR_ EHPQPKLQSQSSIESKPQSSPKSPSTLSQRKPSMIKNIAIPPPATLNMTPQVVQPVVIKA
                              : .   *:. *.*.:***        *     .::  : :..  .:

AT5G61600.1     E-KE-----------------EEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTA
gm053963_Glyma2 IATTMYNNNQVTSSSDETNNIKENKHYRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTA
pt009948_POPTR_ DVSS-----------------EQERHYRGVRRRPWGKYAAEIRDPNKKGARVWLGTFDTA
                  .                  ::::*********************:**.*:****:***

AT5G61600.1     VEAGRAYDQAAFQLRGRKAILNFPLDVRVTS--------ETCSGEGVIGLGKRKRDKGSP
gm053963_Glyma2 IEAAKAYDKAAFKMRGSKAILNFPLEIGESE--------ESVSSCIKVG-VKREREEESK
pt009948_POPTR_ IEAAKAYDSAAFRLRGSKAILNFPLEAGKSNSQQPEQFLETSS-------KKRKIEEIES
                :**.:***.***::** ********:   :.        *: *        **: :: . 

AT5G61600.1     PEEEKAARV-------KVEEEESNTSETTEAEVEPVVPLTPSSWMGFWDVGAGDG-IFSI
gm053963_Glyma2 SNNYEKSEFNNNNNSNKHVKKEECSPK-------AVCPLTPSCWKGFWD-TDVMGTIFSV
pt009948_POPTR_ SMESTGSVIT-----NKVAKRESSSPE-TEVKAAATEPLTPSSWKGFWD-GEVMG-IFNV
                . :   : .       *  :.*. :.:       .. *****.* ****     * **.:

AT5G61600.1     PPLSPTSPN----FSVISVT
gm053963_Glyma2 PPLSPLSP--------LMVV
pt009948_POPTR_ PPLSPLSPHPSFGYSRLMVV
                ***** **        : *.
BoxShade v3.31 C (beta, 970507) Output
AT5G61600.1     M A T K Q E A L A I D F I S Q H L L T D F V S M E - - - - - - - - - - - - - - - - - - T D H P S L F T N Q L H N F H S E
gm053963_Glyma2    M Q S S I S Q S E I - C I T D Y L L P Q E V P S Q - - - F Q F P D M - - - S N N N I P M N H T N L Q M P Q I T S F - - -
pt009948_POPTR_    M A S F D E A S A L E L I R E H L L T D F A S M D S L I T N L D D L C S T S S S C I T T D Y I K T E S T E F D P F N Q S
 
AT5G61600.1     T G P R - - - - - - - - - - T I T N Q S P K P N S T L N Q R K P - - - - - - - - P L P - - - N L S - - V S R T V S T K T
gm053963_Glyma2    - - - - - - - - - - - - - - S K P - - - P R S S S N L S N R K P S L - R N I T I P S I - T S G L T T T M S Q T T T T T T
pt009948_POPTR_    E H P Q P K L Q S Q S S I E S K P Q S S P K S P S T L S Q R K P S M I K N I A I P P P A T L N M T P Q V V Q P V V I K A
 
AT5G61600.1     E - K E - - - - - - - - - - - - - - - - - E E E R H Y R G V R R R P W G K Y A A E I R D P N K K G C R I W L G T Y D T A
gm053963_Glyma2    I A T T M Y N N N Q V T S S S D E T N N I K E N K H Y R G V R R R P W G K Y A A E I R D P N R K G S R V W L G T F D T A
pt009948_POPTR_    D V S S - - - - - - - - - - - - - - - - - E Q E R H Y R G V R R R P W G K Y A A E I R D P N K K G A R V W L G T F D T A
 
AT5G61600.1     V E A G R A Y D Q A A F Q L R G R K A I L N F P L D V R V T S - - - - - - - - E T C S G E G V I G L G K R K R D K G S P
gm053963_Glyma2    I E A A K A Y D K A A F K M R G S K A I L N F P L E I G E S E - - - - - - - - E S V S S C I K V G - V K R E R E E E S K
pt009948_POPTR_    I E A A K A Y D S A A F R L R G S K A I L N F P L E A G K S N S Q Q P E Q F L E T S S - - - - - - - K K R K I E E I E S
 
AT5G61600.1     P E E E K A A R V - - - - - - - K V E E E E S N T S E T T E A E V E P V V P L T P S S W M G F W D V G A G D G - I F S I
gm053963_Glyma2    S N N Y E K S E F N N N N N S N K H V K K E E C S P K - - - - - - - A V C P L T P S C W K G F W D - T D V M G T I F S V
pt009948_POPTR_    S M E S T G S V I T - - - - - N K V A K R E S S S P E - T E V K A A A T E P L T P S S W K G F W D - G E V M G - I F N V
 
AT5G61600.1     P P L S P T S P N - - - - F S V I S V T
gm053963_Glyma2    P P L S P L S P - - - - - - - - L M V V
pt009948_POPTR_    P P L S P L S P H P S F G Y S R L M V V
 
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