fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009948 not found in 288aa AT5G51190.1 1st_not 0.403508771 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G61600.1     MATKQEALAIDFISQHLLTDFVSME------------------TDHPSLFTNQLHNFHSE
pt009948_POPTR_ MASFDEASALELIREHLLTDFASMDSLITNLDDLCSTSSSCITTDYIKTESTEFDPFNQS
                **: :** *:::* :******.**:                  **: .  :.::. *:..

AT5G61600.1     TGPR----------TITNQSPKPNSTLNQRKP--------PLP---NLS--VSRTVSTKT
pt009948_POPTR_ EHPQPKLQSQSSIESKPQSSPKSPSTLSQRKPSMIKNIAIPPPATLNMTPQVVQPVVIKA
                  *:          : .:.***. ***.****        * *   *::  * :.*  *:

AT5G61600.1     E-KEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGR
pt009948_POPTR_ DVSSEQERHYRGVRRRPWGKYAAEIRDPNKKGARVWLGTFDTAIEAAKAYDSAAFRLRGS
                : ..*:**************************.*:****:***:**.:***.***:*** 

AT5G61600.1     KAILNFPLDVRVTS--------ETCSGEGVIGLGKRKRDKGSPPEEEKAARV--KVEEEE
pt009948_POPTR_ KAILNFPLEAGKSNSQQPEQFLETSS-------KKRKIEEIESSMESTGSVITNKVAKRE
                ********:.  :.        **.*        *** :: ... *...: :  ** :.*

AT5G61600.1     SNTSETTEAEVEPVVPLTPSSWMGFWDVGAGDGIFSIPPLSPTSPN----FSVISVT
pt009948_POPTR_ SSSPE-TEVKAAATEPLTPSSWKGFWD-GEVMGIFNVPPLSPLSPHPSFGYSRLMVV
                *.:.* **.:. .. ******* **** *   ***.:***** **:    :* : *.
BoxShade v3.31 C (beta, 970507) Output
AT5G61600.1     M A T K Q E A L A I D F I S Q H L L T D F V S M E - - - - - - - - - - - - - - - - - - T D H P S L F T N Q L H N F H S E
pt009948_POPTR_    M A S F D E A S A L E L I R E H L L T D F A S M D S L I T N L D D L C S T S S S C I T T D Y I K T E S T E F D P F N Q S
 
AT5G61600.1     T G P R - - - - - - - - - - T I T N Q S P K P N S T L N Q R K P - - - - - - - - P L P - - - N L S - - V S R T V S T K T
pt009948_POPTR_    E H P Q P K L Q S Q S S I E S K P Q S S P K S P S T L S Q R K P S M I K N I A I P P P A T L N M T P Q V V Q P V V I K A
 
AT5G61600.1     E - K E E E E R H Y R G V R R R P W G K Y A A E I R D P N K K G C R I W L G T Y D T A V E A G R A Y D Q A A F Q L R G R
pt009948_POPTR_    D V S S E Q E R H Y R G V R R R P W G K Y A A E I R D P N K K G A R V W L G T F D T A I E A A K A Y D S A A F R L R G S
 
AT5G61600.1     K A I L N F P L D V R V T S - - - - - - - - E T C S G E G V I G L G K R K R D K G S P P E E E K A A R V - - K V E E E E
pt009948_POPTR_    K A I L N F P L E A G K S N S Q Q P E Q F L E T S S - - - - - - - K K R K I E E I E S S M E S T G S V I T N K V A K R E
 
AT5G61600.1     S N T S E T T E A E V E P V V P L T P S S W M G F W D V G A G D G I F S I P P L S P T S P N - - - - F S V I S V T
pt009948_POPTR_    S S S P E - T E V K A A A T E P L T P S S W K G F W D - G E V M G I F N V P P L S P L S P H P S F G Y S R L M V V
 
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