fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053963 not found in 266aa AT5G61600.1 1st_1st 0.383458646 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G61600.1     --MATKQEALAIDFISQHLLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQS--PKPN
gm053963_Glyma2 MQSSISQSEIC---ITDYLLPQEVPSQFQFPDMSNNNIPMNHTNLQMPQITSFSKPPRSS
                   : .*. :.   *:::**.: *. : :.*.: .*::   *::     **. *  *:..

AT5G61600.1     STLNQRKPPLPNLSV-----------SRTVST------------------KTEKEEEERH
gm053963_Glyma2 SNLSNRKPSLRNITIPSITSGLTTTMSQTTTTTTIATTMYNNNQVTSSSDETNNIKENKH
                *.*.:***.* *:::           *:*.:*                  :*:: :*::*

AT5G61600.1     YRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD
gm053963_Glyma2 YRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLE
                ********************:**.*:****:***:**.:***:***::** ********:

AT5G61600.1     VRVTSETCSGEGVIGLGKRKRDKGSPPEEEKAARVKVEEEESNTSETTEAEV-------E
gm053963_Glyma2 IGESEESVSSCIKVGV-KRER-------EEESKSNNYEKSEFNNNNNSNKHVKKEECSPK
                :  :.*: *.   :*: **:*       **::   : *:.* *..:.:: .*       :

AT5G61600.1     PVVPLTPSSWMGFWDVGAGDGIFSIPPLSPTSPNFSVISVT
gm053963_Glyma2 AVCPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMVV----
                .* *****.* ****... . ***:***** ** : *
BoxShade v3.31 C (beta, 970507) Output
AT5G61600.1     - - M A T K Q E A L A I D F I S Q H L L T D F V S M E T D H P S L F T N Q L H N F H S E T G P R T I T N Q S - - P K P N
gm053963_Glyma2    M Q S S I S Q S E I C - - - I T D Y L L P Q E V P S Q F Q F P D M S N N N I P M N H T N L Q M P Q I T S F S K P P R S S
 
AT5G61600.1     S T L N Q R K P P L P N L S V - - - - - - - - - - - S R T V S T - - - - - - - - - - - - - - - - - - K T E K E E E E R H
gm053963_Glyma2    S N L S N R K P S L R N I T I P S I T S G L T T T M S Q T T T T T T I A T T M Y N N N Q V T S S S D E T N N I K E N K H
 
AT5G61600.1     Y R G V R R R P W G K Y A A E I R D P N K K G C R I W L G T Y D T A V E A G R A Y D Q A A F Q L R G R K A I L N F P L D
gm053963_Glyma2    Y R G V R R R P W G K Y A A E I R D P N R K G S R V W L G T F D T A I E A A K A Y D K A A F K M R G S K A I L N F P L E
 
AT5G61600.1     V R V T S E T C S G E G V I G L G K R K R D K G S P P E E E K A A R V K V E E E E S N T S E T T E A E V - - - - - - - E
gm053963_Glyma2    I G E S E E S V S S C I K V G V - K R E R - - - - - - - E E E S K S N N Y E K S E F N N N N N S N K H V K K E E C S P K
 
AT5G61600.1     P V V P L T P S S W M G F W D V G A G D G I F S I P P L S P T S P N F S V I S V T
gm053963_Glyma2    A V C P L T P S C W K G F W D T D V M G T I F S V P P L S P L S P L M V V - - - -
 
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