fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm016494 not found in 116aa AT5G61850.1 1st_1st 0.330404217 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G61850.1     MDPEGFTSGLFRWNPTRALVQAPPPVPPPLQQQPVTPQTAAFGMRLGGLEGLFGPYGIRF
Sm016494_Selmo1 ------------------------------------------------------------
                                                                            

AT5G61850.1     YTAAKIAELGFTASTLVGMKDEELEEMMNSLSHIFRWELLVGERYGIKAAVRAERRRLQE
Sm016494_Selmo1 ------------------------------------------------------------
                                                                            

AT5G61850.1     EEEEESSRRRHLLLSAAGDSGTHHALDALSQEGLSEEPVQQQDQTDAAGNNGGGGSGYWD
Sm016494_Selmo1 ------------------------------------------------------------
                                                                            

AT5G61850.1     AGQGKMKKQQQQRRRKKPMLTSVETDEDVNEGEDDDGMDNGNGGSGLGTERQREHPFIVT
Sm016494_Selmo1 ------------------------------------------------------------
                                                                            

AT5G61850.1     EPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAKDRGEKCPTKVTNQVFRYAKKSGASY
Sm016494_Selmo1 ----------------------------------KERGEKCPTKVTNQVFRHAKHRGASY
                                                  *:***************:**: ****

AT5G61850.1     INKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGSWRQACYKPLVNIACRHGWDID
Sm016494_Selmo1 INKPKMRHYVHCYALHCLDLEQSNHLRKVFKDRGENVGAWRQACYYPLVEMARNLNWDIE
                ******************* * ** **:.**:******:****** ***::* . .***:

AT5G61850.1     AVFNAHPRLSIWYVPTKLRQLCHLERNNAVAAAAALVGGISCTGSSTSGRGGCGGDDLRF
Sm016494_Selmo1 GVFSRNDKLRIWYVPTRLRQLCHLEKSK------------EC------------------
                .**. : :* ******:********:.:            .*
BoxShade v3.31 C (beta, 970507) Output
AT5G61850.1     M D P E G F T S G L F R W N P T R A L V Q A P P P V P P P L Q Q Q P V T P Q T A A F G M R L G G L E G L F G P Y G I R F
Sm016494_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G61850.1     Y T A A K I A E L G F T A S T L V G M K D E E L E E M M N S L S H I F R W E L L V G E R Y G I K A A V R A E R R R L Q E
Sm016494_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G61850.1     E E E E E S S R R R H L L L S A A G D S G T H H A L D A L S Q E G L S E E P V Q Q Q D Q T D A A G N N G G G G S G Y W D
Sm016494_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G61850.1     A G Q G K M K K Q Q Q Q R R R K K P M L T S V E T D E D V N E G E D D D G M D N G N G G S G L G T E R Q R E H P F I V T
Sm016494_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G61850.1     E P G E V A R G K K N G L D Y L F H L Y E Q C R E F L L Q V Q T I A K D R G E K C P T K V T N Q V F R Y A K K S G A S Y
Sm016494_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K E R G E K C P T K V T N Q V F R H A K H R G A S Y
 
AT5G61850.1     I N K P K M R H Y V H C Y A L H C L D E E A S N A L R R A F K E R G E N V G S W R Q A C Y K P L V N I A C R H G W D I D
Sm016494_Selmo1    I N K P K M R H Y V H C Y A L H C L D L E Q S N H L R K V F K D R G E N V G A W R Q A C Y Y P L V E M A R N L N W D I E
 
AT5G61850.1     A V F N A H P R L S I W Y V P T K L R Q L C H L E R N N A V A A A A A L V G G I S C T G S S T S G R G G C G G D D L R F
Sm016494_Selmo1    G V F S R N D K L R I W Y V P T R L R Q L C H L E K S K - - - - - - - - - - - - E C - - - - - - - - - - - - - - - - - -
 
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