fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015432 not found in 239aa AT5G61890.1 1st_1st 0.408312958 Ia
Gm010347 not found in 262aa AT5G61890.1 not_1st 0.405867970 II
Pt023159 not found in 240aa AT5G61890.1 1st_1st 0.344743276 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G61890.1     MYGKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKS---HDNISS
gm010347_Glyma0 MEGRSI---SHSSEREEEYGLFPIYSERSQQDMSAMVSALTQVIGGSNSDSLHMHEGLLT
pt023159_POPTR_ --------------------------------MDVMVSALAQVIGSSHNSSAQVQENPLT
gm015432_Glyma0 MEGRSI---SHSSEREEEYDLFPIYSERSQQDMSAMVSALTQVIGGSNSDSLQQHEGLLT
                                                * .*****:****..:..*   ::.  :

AT5G61890.1     IDDNYPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLG
gm010347_Glyma0 SSHNNTST---QNTNEQSQVQQQEQGSVRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLG
pt023159_POPTR_ STQSSTE-------NDQTQPAVQDQGNARRRHYRGVRQRPWGKWAAEIRDPKKAARVWLG
gm015432_Glyma0 SSHNNTST---QNNNEQSQAPQQEQGSVRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLG
                  .. ..       *:*     *:**. ********************************

AT5G61890.1     TFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNST-YYSSNQI-------------
gm010347_Glyma0 TFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTASEFGYLTNQHMSSSSTNSNPVAPH
pt023159_POPTR_ TFETAEAAALAYDEAALRFKGSKAKLNFPERVPSGGTELGFFTRGQ--GLHTVTEPVSNH
gm015432_Glyma0 TFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTASEF---------------------
                ******:**********:**************   ...                      

AT5G61890.1     ---P------QMEPQSIPN-YNQYYHDA----------SSGDMLSFNLGGGYGSGTGYSM
gm010347_Glyma0 LT--------TQETYS-PS-HFQYAQQQFMSGESNSF-SNQDMLRF-----YGGDNMFV-
pt023159_POPTR_ IMAPLARSQRSQEAYN-PN-NFQYPQ---FLGTTSGYGLSHVMPPAV---PFGGETFLS-
gm015432_Glyma0 ------------ETYS-PSHHFQYAQQQLMGGGSNSFNNNQDMLRF-----YGGHNMFV-
                            *. . *.   ** :             .  *        :*. .    

AT5G61890.1     SHDNSTTTAATTSS---SSGGSSRQQEEQDYARF-WRFGDSSSSPHSGY-------
gm010347_Glyma0 ----SSQQSASSSS---STALSQQQQEE--LLKFSMQFGGSSHSNHSGNWRGGH--
pt023159_POPTR_ ----PTSSSASSNSWPISSQQQQQQQEE--LLRLSMQFGSSYNSRYDPSKYKDEGL
gm015432_Glyma0 ----SSQQSASSSS---STALSQNQQDE--LLRFSMQFGASSHSDHSGNWRGGQ--
                    .:  :*::.*   *:  ...**:*    ::  :** *  * :.
BoxShade v3.31 C (beta, 970507) Output
AT5G61890.1     M Y G K R P F G G D E S E E R E E D E N L F P V F S A R S Q H D M R V M V S A L T Q V I G N Q Q S K S - - - H D N I S S
gm010347_Glyma0    M E G R S I - - - S H S S E R E E E Y G L F P I Y S E R S Q Q D M S A M V S A L T Q V I G G S N S D S L H M H E G L L T
pt023159_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D V M V S A L A Q V I G S S H N S S A Q V Q E N P L T
gm015432_Glyma0    M E G R S I - - - S H S S E R E E E Y D L F P I Y S E R S Q Q D M S A M V S A L T Q V I G G S N S D S L Q Q H E G L L T
 
AT5G61890.1     I D D N Y P S V Y N P Q D P N Q Q V A P T H Q D Q G D L R R R H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G
gm010347_Glyma0    S S H N N T S T - - - Q N T N E Q S Q V Q Q Q E Q G S V R R R H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G
pt023159_POPTR_    S T Q S S T E - - - - - - - N D Q T Q P A V Q D Q G N A R R R H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G
gm015432_Glyma0    S S H N N T S T - - - Q N N N E Q S Q A P Q Q E Q G S V R R R H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G
 
AT5G61890.1     T F E T A E S A A L A Y D E A A L K F K G S K A K L N F P E R V Q L G S N S T - Y Y S S N Q I - - - - - - - - - - - - -
gm010347_Glyma0    T F E T A E A A A L A Y D E A A L R F K G S K A K L N F P E R V Q G T A S E F G Y L T N Q H M S S S S T N S N P V A P H
pt023159_POPTR_    T F E T A E A A A L A Y D E A A L R F K G S K A K L N F P E R V P S G G T E L G F F T R G Q - - G L H T V T E P V S N H
gm015432_Glyma0    T F E T A E A A A L A Y D E A A L R F K G S K A K L N F P E R V Q G T A S E F - - - - - - - - - - - - - - - - - - - - -
 
AT5G61890.1     - - - P - - - - - - Q M E P Q S I P N - Y N Q Y Y H D A - - - - - - - - - - S S G D M L S F N L G G G Y G S G T G Y S M
gm010347_Glyma0    L T - - - - - - - - T Q E T Y S - P S - H F Q Y A Q Q Q F M S G E S N S F - S N Q D M L R F - - - - - Y G G D N M F V -
pt023159_POPTR_    I M A P L A R S Q R S Q E A Y N - P N - N F Q Y P Q - - - F L G T T S G Y G L S H V M P P A V - - - P F G G E T F L S -
gm015432_Glyma0    - - - - - - - - - - - - E T Y S - P S H H F Q Y A Q Q Q L M G G G S N S F N N N Q D M L R F - - - - - Y G G H N M F V -
 
AT5G61890.1     S H D N S T T T A A T T S S - - - S S G G S S R Q Q E E Q D Y A R F - W R F G D S S S S P H S G Y - - - - - - -
gm010347_Glyma0    - - - - S S Q Q S A S S S S - - - S T A L S Q Q Q Q E E - - L L K F S M Q F G G S S H S N H S G N W R G G H - -
pt023159_POPTR_    - - - - P T S S S A S S N S W P I S S Q Q Q Q Q Q Q E E - - L L R L S M Q F G S S Y N S R Y D P S K Y K D E G L
gm015432_Glyma0    - - - - S S Q Q S A S S S S - - - S T A L S Q N Q Q D E - - L L R F S M Q F G A S S H S D H S G N W R G G Q - -
 
0