fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G61890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023159 not found in 240aa AT5G61890.1 1st_1st 0.344743276 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G61890.1     MYGKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDD
pt023159_POPTR_ --------------------------------MDVMVSALAQVIGS----SHNSSAQVQE
                                                * ******:****.    **:. :.:::

AT5G61890.1     NYPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFE
pt023159_POPTR_ NPLTSTQSSTENDQTQPAVQDQGNARRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFE
                *  :  :..  *:*. *: ****: ***********************************

AT5G61890.1     TAESAALAYDEAALKFKGSKAKLNFPERVQLGSNS-------------TYYSSNQIPQME
pt023159_POPTR_ TAEAAALAYDEAALRFKGSKAKLNFPERVPSGGTELGFFTRGQGLHTVTEPVSNHI--MA
                ***:**********:**************  *...             *   **:*  * 

AT5G61890.1     PQSIPNYNQYYHDASSGDMLSFNLGGGYGSGTGYSMSH--------DNSTTTAATTSSSS
pt023159_POPTR_ PLARSQRSQEAYNPNNFQYPQF-----LGTTSGYGLSHVMPPAVPFGGETFLSPTSSSAS
                * : .: .*  ::... :  .*      *: :**.:**        ...*  :.*:**:*

AT5G61890.1     GGS---SRQQEEQDYARFWR----FGDSSSSPH--SGY-----
pt023159_POPTR_ SNSWPISSQQQQQQQEELLRLSMQFGSSYNSRYDPSKYKDEGL
                ..*   * **::*:  .: *    **.* .* :  * *
BoxShade v3.31 C (beta, 970507) Output
AT5G61890.1     M Y G K R P F G G D E S E E R E E D E N L F P V F S A R S Q H D M R V M V S A L T Q V I G N Q Q S K S H D N I S S I D D
pt023159_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D V M V S A L A Q V I G S - - - - S H N S S A Q V Q E
 
AT5G61890.1     N Y P S V Y N P Q D P N Q Q V A P T H Q D Q G D L R R R H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G T F E
pt023159_POPTR_    N P L T S T Q S S T E N D Q T Q P A V Q D Q G N A R R R H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G T F E
 
AT5G61890.1     T A E S A A L A Y D E A A L K F K G S K A K L N F P E R V Q L G S N S - - - - - - - - - - - - - T Y Y S S N Q I P Q M E
pt023159_POPTR_    T A E A A A L A Y D E A A L R F K G S K A K L N F P E R V P S G G T E L G F F T R G Q G L H T V T E P V S N H I - - M A
 
AT5G61890.1     P Q S I P N Y N Q Y Y H D A S S G D M L S F N L G G G Y G S G T G Y S M S H - - - - - - - - D N S T T T A A T T S S S S
pt023159_POPTR_    P L A R S Q R S Q E A Y N P N N F Q Y P Q F - - - - - L G T T S G Y G L S H V M P P A V P F G G E T F L S P T S S S A S
 
AT5G61890.1     G G S - - - S R Q Q E E Q D Y A R F W R - - - - F G D S S S S P H - - S G Y - - - - -
pt023159_POPTR_    S N S W P I S S Q Q Q Q Q Q Q E E L L R L S M Q F G S S Y N S R Y D P S K Y K D E G L
 
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