fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62000.3 QMIHSGLSLKLHESPK at 563/859 in AT5G62000.1
QMIHSGLSLKLHESPK at 563/859 in AT5G62000.2
QMIHSGLSLKLHESPK at 563/859 in AT5G62000.3
QMIHSGLSLKLHESPK at 563/853 in AT5G62000.4
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031617 not found in 1005aa AT5G62000.3 1st_1st 0.448450347 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62000.3     --MASSEVSMKGNRGGDNFSSSGFSDPKETRNVSVAGEGQKSNSTRSAAAERALDPEAAL
Sb031617_Sorbi1 DPMAAAAPAAGGGGGAE---------------AGCGGGGGK-------------DP---L
                  **::  :  *. *.:               .. .* * *             **   *

AT5G62000.3     YRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQ-MPLYDLPSKLLCRVI
Sb031617_Sorbi1 FVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKLM
                : ***:****** :**  .::*:**************** ****  ***:** *: *:::

AT5G62000.3     NVDLKAEADTDEVYAQITLLPEANQDEN---------AIEKEAPLPPP----PRFQVHSF
Sb031617_Sorbi1 NIELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPR--IHSF
                *::****.********:****: :****         * *: .* .**    **  :***

AT5G62000.3     CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQP
Sb031617_Sorbi1 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQP
                ********************************::**.*********. ************

AT5G62000.3     RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL
Sb031617_Sorbi1 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHL
                **************:**************************:*:* .:************

AT5G62000.3     GVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAP
Sb031617_Sorbi1 GVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAA
                *********:.**:************:**:*. *:* **:*.*****************.

AT5G62000.3     EQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPV
Sb031617_Sorbi1 EQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPVNPL
                ***********  ***: *..************:**:***:*****::***::*..:.*:

AT5G62000.3     PMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESV
Sb031617_Sorbi1 PV-RFKRSRSSVNASPSDVPTVSREVASKV-MAESQQSNLPRALHNQGRTQLTGRYHDSS
                *: * **.**.: .*..* . ::** ::*. *     *.*.*.*:.*  : *  :: :* 

AT5G62000.3     ECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNID----
Sb031617_Sorbi1 DVKTAQDLTMWSSGTEQQRNNIAAQTKR-SLEGWTQS-RTPEGYNQLFSAFQPLKDTHNP
                : .:.:: .:*.*.::::: ::.: ::* . *.* .* *    *.:*:*.* .  *    

AT5G62000.3     ----PSH--GQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQ-MIH-SGLSLKLHES
Sb031617_Sorbi1 LCTFPSQISGTRSNTWD-TADARYPAQ------QANHNMLHGTWPFMPHSSGFRTNQQNY
                    **:  * *   :* ::..  **:      :.:.: * . *  * * **:  : :: 

AT5G62000.3     PKVPAATDASLQGRCNVKYSEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAR
Sb031617_Sorbi1 LVMPEA--AKFTGK-----SAFTSLQGHGTDQCSTGW------FGHIES--SSRTDHASS
                  :* *  *.: *:     * :. *:* .*::.. .*      :.: *.  .::::  : 

AT5G62000.3     EQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGT--------------DSTMSQRNNL
Sb031617_Sorbi1 SSIRPQPLVIGNDVQKTKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQ
                ..:  **:.* ::. *::  . :****** .  :.               ::: *::.* 

AT5G62000.3     NDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPF---------QTNNPHPKDAQT--
Sb031617_Sorbi1 LDIVG--------VDNCSDPSKTVK----------PFDGPQSDSITENNQPCPEATQNIQ
                 * .*        *:: ** **  *          **         :.*:* *: :*.  

AT5G62000.3     ---KTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIV
Sb031617_Sorbi1 NKVQSSSTRSCKKVHKQGSALGRSIDLTKFTCYDELIAELDQMFDFDGELKNPCKNWLVV
                   ::.*:***.****** *****:**:**  *:**:****::*:*:***  * *:**:*

AT5G62000.3     YTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEA--VVGEGSDA
Sb031617_Sorbi1 YTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSEDSLSDSQGRGLAS
                ***:*.*:********:*** **:******:***.:****:*..***:.     *.*  :

AT5G62000.3     KD----AKSASNPSLSSAGNS
Sb031617_Sorbi1 KEPPRGGPSTSTPNSESC---
                *:    . *:*.*. .*.
BoxShade v3.31 C (beta, 970507) Output
AT5G62000.3     - - M A S S E V S M K G N R G G D N F S S S G F S D P K E T R N V S V A G E G Q K S N S T R S A A A E R A L D P E A A L
Sb031617_Sorbi1    D P M A A A A P A A G G G G G A E - - - - - - - - - - - - - - - A G C G G G G G K - - - - - - - - - - - - - D P - - - L
 
AT5G62000.3     Y R E L W H A C A G P L V T V P R Q D D R V F Y F P Q G H I E Q V E A S T N Q A A E Q Q - M P L Y D L P S K L L C R V I
Sb031617_Sorbi1    F V E L W K A C A G P L S S V P P L G E K V Y Y F P Q G H I E Q V E A S T N Q I A E Q Q G T P L Y N L P W K I P C K L M
 
AT5G62000.3     N V D L K A E A D T D E V Y A Q I T L L P E A N Q D E N - - - - - - - - - A I E K E A P L P P P - - - - P R F Q V H S F
Sb031617_Sorbi1    N I E L K A E P D T D E V Y A Q L T L L P D K K Q D E N T S T T V E N E E A E E E V V P H A P P T N E G P R - - I H S F
 
AT5G62000.3     C K T L T A S D T S T H G G F S V L R R H A D E C L P P L D M S R Q P P T Q E L V A K D L H A N E W R F R H I F R G Q P
Sb031617_Sorbi1    C K T L T A S D T S T H G G F S V L R R H A D E C L P P L D M S Q H P P N Q E L V A K D L H G I E W R F R H I F R G Q P
 
AT5G62000.3     R R H L L Q S G W S V F V S S K R L V A G D A F I F L R G E N G E L R V G V R R A M R Q Q G N V P S S V I S S H S M H L
Sb031617_Sorbi1    R R H L L Q S G W S V F V S A K R L V A G D A F I F L R G E N G E L R V G V R R A L R H Q T T I P S S V I S S H S M H L
 
AT5G62000.3     G V L A T A W H A I S T G T M F T V Y Y K P R T S P S E F I V P F D Q Y M E S V K N N Y S I G M R F K M R F E G E E A P
Sb031617_Sorbi1    G V L A T A W H A V N T G S M F T V Y Y K P R T S P A E F V V S R D R Y Y E S L K R N Y S I G M R F K M R F E G E E A A
 
AT5G62000.3     E Q R F T G T I V G I E E S D P T R W P K S K W R S L K V R W D E T S S I P R P D R V S P W K V E P A L A P P A L S P V
Sb031617_Sorbi1    E Q R F T G T I V G I G A S D P S G W A D S K W R S L K V R W D E A S S V P R P E R V S P W Q I E P A I S P S P V N P L
 
AT5G62000.3     P M P R P K R P R S N I A P S S P D S S M L T R E G T T K A N M D P L P A S G L S R V L Q G Q E Y S T L R T K H T E S V
Sb031617_Sorbi1    P V - R F K R S R S S V N A S P S D V P T V S R E V A S K V - M A E S Q Q S N L P R A L H N Q G R T Q L T G R Y H D S S
 
AT5G62000.3     E C D A P E N S V V W Q S S A D D D K V D V V S G S R R Y G S E N W M S S A R H E P T Y T D L L S G F G T N I D - - - -
Sb031617_Sorbi1    D V K T A Q D L T M W S S G T E Q Q R N N I A A Q T K R - S L E G W T Q S - R T P E G Y N Q L F S A F Q P L K D T H N P
 
AT5G62000.3     - - - - P S H - - G Q R I P F Y D H S S S P S M P A K R I L S D S E G K F D Y L A N Q W Q - M I H - S G L S L K L H E S
Sb031617_Sorbi1    L C T F P S Q I S G T R S N T W D - T A D A R Y P A Q - - - - - - Q A N H N M L H G T W P F M P H S S G F R T N Q Q N Y
 
AT5G62000.3     P K V P A A T D A S L Q G R C N V K Y S E Y P V L N G L S T E N A G G N W P I R P R A L N Y Y E E V V N A Q A Q A Q A R
Sb031617_Sorbi1    L V M P E A - - A K F T G K - - - - - S A F T S L Q G H G T D Q C S T G W - - - - - - F G H I E S - - S S R T D H A S S
 
AT5G62000.3     E Q V T K Q P F T I Q E E T A K S R E G N C R L F G I P L T N N M N G T - - - - - - - - - - - - - - D S T M S Q R N N L
Sb031617_Sorbi1    S S I R P Q P L V I G N D V Q K T K G T S F K L F G I P L G S P E K S E P L V S P P S V A Y D G K L Q T S P S E K G N Q
 
AT5G62000.3     N D A A G L T Q I A S P K V Q D L S D Q S K G S K S T N D H R E Q G R P F - - - - - - - - - Q T N N P H P K D A Q T - -
Sb031617_Sorbi1    L D I V G - - - - - - - - V D N C S D P S K T V K - - - - - - - - - - P F D G P Q S D S I T E N N Q P C P E A T Q N I Q
 
AT5G62000.3     - - - K T N S S R S C T K V H K Q G I A L G R S V D L S K F Q N Y E E L V A E L D R L F E F N G E L M A P K K D W L I V
Sb031617_Sorbi1    N K V Q S S S T R S C K K V H K Q G S A L G R S I D L T K F T C Y D E L I A E L D Q M F D F D G E L K N P C K N W L V V
 
AT5G62000.3     Y T D E E N D M M L V G D D P W Q E F C C M V R K I F I Y T K E E V R K M N P G T L S C R S E E E A - - V V G E G S D A
Sb031617_Sorbi1    Y T D N E G D I M L V G D D P W N E F C D M V H K I F I Y T R E E V E R M N P G A L N S R S E D S L S D S Q G R G L A S
 
AT5G62000.3     K D - - - - A K S A S N P S L S S A G N S
Sb031617_Sorbi1    K E P P R G G P S T S T P N S E S C - - -
 
0