fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62000.3 QMIHSGLSLKLHESPK at 563/859 in AT5G62000.1
QMIHSGLSLKLHESPK at 563/859 in AT5G62000.2
QMIHSGLSLKLHESPK at 563/859 in AT5G62000.3
QMIHSGLSLKLHESPK at 563/853 in AT5G62000.4
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010335 not found in 843aa AT5G62000.3 1st_1st 0.632511068 Ia

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62000.3     MASSEVSMKGNRGGDNFSSSGFSDPKETRNVSVAGEGQKSNSTRSAAAERALDPEAALYR
gm010335_Glyma0 MTSLEVTMKGN--CLNHNDGGATEP-------------HSPST-------AKDAEAALFR
                *:* **:****    *....* ::*             :* **       * *.****:*

AT5G62000.3     ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVD
gm010335_Glyma0 ELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQ
                ***************: :*******************.*:*:**:****.*:*******:

AT5G62000.3     LKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFS
gm010335_Glyma0 LKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS
                ****.*****:**:*****.******:***.* ******:********************

AT5G62000.3     VLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSK
gm010335_Glyma0 VLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSK
                ****************:*******************:***********************

AT5G62000.3     RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMF
gm010335_Glyma0 RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTIF
                **********************************************************:*

AT5G62000.3     TVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDP
gm010335_Glyma0 TVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDP
                **********:*****:******:********************************:***

AT5G62000.3     TRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIAPSS
gm010335_Glyma0 KRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSS
                .** .****.*********. ***:******:*********.*:.********** .***

AT5G62000.3     PDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQSSA-
gm010335_Glyma0 PDSSVLTREASSKVSIDPSPANGFPRVLQGQEFSTLRGNFAESNESDTAEKSVVWPPAAV
                ****:****.::*..:** **.*:.*******:**** :.:** *.*:.*:**** .:* 

AT5G62000.3     DDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSPSMP
gm010335_Glyma0 DDEKMD-VSTSRRYGSESWMSMGRNEPTYSDLLSGFGASGDPSH---LSLKDQ-MSPAYS
                **:*:* ** *******.*** .*:****:*******:. ****   :.: *:  **: .

AT5G62000.3     AKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKYS---EY
gm010335_Glyma0 ARKQSLDHEGKL-HMPHPWPVMPSSLSLSILDSNTKGPAHGGDTTYKARGNLRYSAFGEY
                *::   * ***: ::.: * :: *.***.: :* .* ** . *:: :.* *::**   **

AT5G62000.3     PVLNGLSTENAGGN-WPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREGN
gm010335_Glyma0 PALHGHKVEHSHGNLMPPPPALLTQYQSPC-------SRELMSKQVSAKTCEAVKPKDGD
                *.*:* ..*:: **  *  *  *. *:.         :** ::**  :   *:.*.::*:

AT5G62000.3     CRLFGIPLTNNMNGTDSTMSQRNNLNDAAG---LT---QIASPKVQDLSDQSKGSKSTND
gm010335_Glyma0 CKLFGFSLISGPTLPEPSLSQR-NVSEAADQMHLTAHQQRTSENDEKL-DHSKGSRPVDD
                *:***:.* .. . .:.::*** *:.:**.   **   * :* : :.* *:****:..:*

AT5G62000.3     --HREQGRPFQTNNPHPKDAQTK--TNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAE
gm010335_Glyma0 IVVDDQDRPLRTSQLHTKDVQAKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAE
                    :*.**::*.: *.**.*:*  :.*:********:**********:*:..*:*****

AT5G62000.3     LDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP
gm010335_Glyma0 LDQLFEFGGELLSTKKDWLIVFTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSP
                **:****.***::.*******:**:*.**************.*****:**.***::**.*

AT5G62000.3     GTLSCRSEEEAVV--GEGSDAKDAKSASNPSLSSAGNS--
gm010335_Glyma0 GTLSSKNEENHSVTASEGADTKDVKCQPHQKFNSENGLDA
                ****.:.**:  *  .**:*:**.*. .: .:.* ..   


BoxShade v3.31 C (beta, 970507) Output
AT5G62000.3     M A S S E V S M K G N R G G D N F S S S G F S D P K E T R N V S V A G E G Q K S N S T R S A A A E R A L D P E A A L Y R
gm010335_Glyma0    M T S L E V T M K G N - - C L N H N D G G A T E P - - - - - - - - - - - - - H S P S T - - - - - - - A K D A E A A L F R
 
AT5G62000.3     E L W H A C A G P L V T V P R Q D D R V F Y F P Q G H I E Q V E A S T N Q A A E Q Q M P L Y D L P S K L L C R V I N V D
gm010335_Glyma0    E L W H A C A G P L V T V P R E R E R V F Y F P Q G H I E Q V E A S T N Q V A D Q H M P V Y D L P P K I L C R V I N V Q
 
AT5G62000.3     L K A E A D T D E V Y A Q I T L L P E A N Q D E N A I E K E A P L P P P P R F Q V H S F C K T L T A S D T S T H G G F S
gm010335_Glyma0    L K A E P D T D E V F A Q V T L L P E P N Q D E N A V E K E P P P P P P P R F H V H S F C K T L T A S D T S T H G G F S
 
AT5G62000.3     V L R R H A D E C L P P L D M S R Q P P T Q E L V A K D L H A N E W R F R H I F R G Q P R R H L L Q S G W S V F V S S K
gm010335_Glyma0    V L R R H A D E C L P P L D M S K Q P P T Q E L V A K D L H A N E W R F K H I F R G Q P R R H L L Q S G W S V F V S S K
 
AT5G62000.3     R L V A G D A F I F L R G E N G E L R V G V R R A M R Q Q G N V P S S V I S S H S M H L G V L A T A W H A I S T G T M F
gm010335_Glyma0    R L V A G D A F I F L R G E N G E L R V G V R R A M R Q Q G N V P S S V I S S H S M H L G V L A T A W H A I S T G T I F
 
AT5G62000.3     T V Y Y K P R T S P S E F I V P F D Q Y M E S V K N N Y S I G M R F K M R F E G E E A P E Q R F T G T I V G I E E S D P
gm010335_Glyma0    T V Y Y K P R T S P A E F I V P Y D Q Y M E S L K N N Y S I G M R F K M R F E G E E A P E Q R F T G T I V G I E D S D P
 
AT5G62000.3     T R W P K S K W R S L K V R W D E T S S I P R P D R V S P W K V E P A L A P P A L S P V P M P R P K R P R S N I A P S S
gm010335_Glyma0    K R W R D S K W R C L K V R W D E T S N T P R P E R V S P W K I E P A L A P P A L N P L S M P R P K R P R S N A V P S S
 
AT5G62000.3     P D S S M L T R E G T T K A N M D P L P A S G L S R V L Q G Q E Y S T L R T K H T E S V E C D A P E N S V V W Q S S A -
gm010335_Glyma0    P D S S V L T R E A S S K V S I D P S P A N G F P R V L Q G Q E F S T L R G N F A E S N E S D T A E K S V V W P P A A V
 
AT5G62000.3     D D D K V D V V S G S R R Y G S E N W M S S A R H E P T Y T D L L S G F G T N I D P S H G Q R I P F Y D H S S S P S M P
gm010335_Glyma0    D D E K M D - V S T S R R Y G S E S W M S M G R N E P T Y S D L L S G F G A S G D P S H - - - L S L K D Q - M S P A Y S
 
AT5G62000.3     A K R I L S D S E G K F D Y L A N Q W Q M I H S G L S L K L H E S - P K V P A - A T D A S L Q G R C N V K Y S - - - E Y
gm010335_Glyma0    A R K Q S L D H E G K L - H M P H P W P V M P S S L S L S I L D S N T K G P A H G G D T T Y K A R G N L R Y S A F G E Y
 
AT5G62000.3     P V L N G L S T E N A G G N - W P I R P R A L N Y Y E E V V N A Q A Q A Q A R E Q V T K Q P F T I Q E E T A K S R E G N
gm010335_Glyma0    P A L H G H K V E H S H G N L M P P P P A L L T Q Y Q S P C - - - - - - - S R E L M S K Q V S A K T C E A V K P K D G D
 
AT5G62000.3     C R L F G I P L T N N M N G T D S T M S Q R N N L N D A A G - - - L T - - - Q I A S P K V Q D L S D Q S K G S K S T N D
gm010335_Glyma0    C K L F G F S L I S G P T L P E P S L S Q R - N V S E A A D Q M H L T A H Q Q R T S E N D E K L - D H S K G S R P V D D
 
AT5G62000.3     - - H R E Q G R P F Q T N N P H P K D A Q T K - - T N S S R S C T K V H K Q G I A L G R S V D L S K F Q N Y E E L V A E
gm010335_Glyma0    I V V D D Q D R P L R T S Q L H T K D V Q A K P L S G S A R S C T K V H K K G I A L G R S V D L T K Y S G Y D E L V A E
 
AT5G62000.3     L D R L F E F N G E L M A P K K D W L I V Y T D E E N D M M L V G D D P W Q E F C C M V R K I F I Y T K E E V R K M N P
gm010335_Glyma0    L D Q L F E F G G E L L S T K K D W L I V F T D N E G D M M L V G D D P W Q E F C A M V R K I Y I Y P K E E I Q K M S P
 
AT5G62000.3     G T L S C R S E E E A V V - - G E G S D A K D A K S A S N P S L S S A G N S - -
gm010335_Glyma0    G T L S S K N E E N H S V T A S E G A D T K D V K C Q P H Q K F N S E N G L D A
 
0