fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045241 LIPNPKLFGVAIGAK in 270/348 AT5G62020.1 not_1st 0.474489795 II
Gm054819 EEMNPKLFGVAIGKK in 234/300 AT5G62020.1 not_1st 0.452380952 II
Gm028649 EEMNPKLFGVVIGTK in 229/289 AT5G62020.1 not_1st 0.435374149 II
Pt026513 RSSSPGLSLELLDENE in 165/286 AT5G62020.1 not_1st 0.411564625 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62020.1     MN-SPPVD----------AMITGESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSS
pt026513_POPTR_ MASPLPVEQNSGETPPSPLAAAAGGETSRSIPTPFLTKTFKIVDDHTIDDVISWNEDGSS
gm054819_Glyma2 MA--PPLEHNG---------VSTSGDSQRSIPTPFLTKTYQLVDDHTIDDVISWNDSGSS
gm045241_Glyma1 MAPPPPVEHNGDSA--ATASASASAESQRSIPTPFLTKTYQLVDDQSIDDVISWNDDGST
gm028649_Glyma1 MA--PPLEHNG---------VSTSGDSLRSIPTPFLTKTFQLVDDHTIDHVISWNDSGSS
                *    *::             :  ..: ***********:::*:* :**.*****:.**:

AT5G62020.1     FIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLRE
pt026513_POPTR_ FVVWNPTLFSRDLLPKFFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRKGEKNLLCE
gm054819_Glyma2 FIVWNTTAFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCE
gm045241_Glyma1 FIVWNPTVFARDLLPKFFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDYFRRGEKRLLCE
gm028649_Glyma1 FIVWNTTAFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRDEKRLLCE
                *:***.* *::*****.******************:***********: *::.**.** *

AT5G62020.1     IQRRKIT---------TTHQTVVAPSSEQRNQTM--VVSPSNSGEDNNNNQVMSSSPSSW
pt026513_POPTR_ IQRRKLV--------ATVAQVVAAPAAVKVIKTS------SNSSSD---EQVVISTRSSS
gm054819_Glyma2 IQRRKILSASPPPAGATATVAVPSPLPLSAIPTAKPIVSPSNSAEE----QVLSSNSSPA
gm045241_Glyma1 IQRRKISSPAPSP---TAPTTVTVPMPLTAIP----IISPSNSGEE----QVISSNSSPL
gm028649_Glyma1 IQRRKILPAT-PPTRATATAAVLSPLPLSTIPPAKLIVSPSNSAEE----QVISSNSSPA
                *****:          *.  .*  * .             ***..:    **: *. *. 

AT5G62020.1     YCHQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQPTDR
pt026513_POPTR_ ----------PGLSLELLDENERLRKENVRLKGELTEMKSLCGNIFSLVSDFESLREEEE
gm054819_Glyma2 RA-----------PVELLDENERLRKENILLTKELVKMRSLCNNIFNLMSNYAN------
gm045241_Glyma1 RA-----------PAELLDENERLRKENVQLTKELAEMRSLCNNIYSLMSSYGNKNGNSN
gm028649_Glyma1 ---------------ELLDENDRLRKENILLTKELEEMRSLCNNIFNLMSNYAN------
                               ***:**::**.:*: *. ** :*:*:*.**:.*:*.: .      

AT5G62020.1     --SYSPGGSSSQ------------PMEFLPAKRFSEMEIEEEEEA------SPRLFGVPI
pt026513_POPTR_ -------------------EEVRKVLDLLPMK--------EEVGD------GARIFGVEV
gm054819_Glyma2 --AQADGSSAAA------------------AKRCSGEDAVEEM--------NPKLFGVAI
gm045241_Glyma1 GSYQTDGGAGGAQGSRESGMTAVKPLDLMPVKRSSGEDAADTVPKEINLIPNPKLFGVAI
gm028649_Glyma1 --VQADGGSAGV------------------AARCFGEDAVEEM--------NPKLFGVVI
                                                        :          ..::*** :

AT5G62020.1     GLKRTRSEG------------------------------VQVKTTAV--VGENSDEETPW
pt026513_POPTR_ GVKRGRELSG-----------DMEVEEDGMQLRLRQPGGGSSDGVKIEVNGSRNGDR---
gm054819_Glyma2 GKKRAREEEG------------HGAKYDTA-LSLHQPFHADVKSEALDLPGRGENKKTPW
gm045241_Glyma1 GAKRAREGGGGSGSGRDCGGGGGGGEEDTL-LRLHHVGSADVKSEPLDCQNHRENQETPW
gm028649_Glyma1 GTKRAREEN------------------DTV-LSLHQPFHADVKSEALDFARRGENKKTPW
                * ** *.                                 . .   :      ....   

AT5G62020.1     LRHYNRTNQRVCN
pt026513_POPTR_ -------------
gm054819_Glyma2 LNQCHRANQRVCN
gm045241_Glyma1 LSPCHRTNQRVCN
gm028649_Glyma1 LNQCHRANQRVCN
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N - S P P V D - - - - - - - - - - A M I T G E S S S Q R S I P T P F L T K T F N L V E D S S I D D V I S W N E D G S S
pt026513_POPTR_    M A S P L P V E Q N S G E T P P S P L A A A A G G E T S R S I P T P F L T K T F K I V D D H T I D D V I S W N E D G S S
gm054819_Glyma2    M A - - P P L E H N G - - - - - - - - - V S T S G D S Q R S I P T P F L T K T Y Q L V D D H T I D D V I S W N D S G S S
gm045241_Glyma1    M A P P P P V E H N G D S A - - A T A S A S A S A E S Q R S I P T P F L T K T Y Q L V D D Q S I D D V I S W N D D G S T
gm028649_Glyma1    M A - - P P L E H N G - - - - - - - - - V S T S G D S L R S I P T P F L T K T F Q L V D D H T I D H V I S W N D S G S S
 
AT5G62020.1     F I V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G E K R L L R E
pt026513_POPTR_    F V V W N P T L F S R D L L P K F F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E C F R K G E K N L L C E
gm054819_Glyma2    F I V W N T T A F A K D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E Y F R R G E K R L L C E
gm045241_Glyma1    F I V W N P T V F A R D L L P K F F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N D Y F R R G E K R L L C E
gm028649_Glyma1    F I V W N T T A F A K D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E Y F R R D E K R L L C E
 
AT5G62020.1     I Q R R K I T - - - - - - - - - T T H Q T V V A P S S E Q R N Q T M - - V V S P S N S G E D N N N N Q V M S S S P S S W
pt026513_POPTR_    I Q R R K L V - - - - - - - - A T V A Q V V A A P A A V K V I K T S - - - - - - S N S S S D - - - E Q V V I S T R S S S
gm054819_Glyma2    I Q R R K I L S A S P P P A G A T A T V A V P S P L P L S A I P T A K P I V S P S N S A E E - - - - Q V L S S N S S P A
gm045241_Glyma1    I Q R R K I S S P A P S P - - - T A P T T V T V P M P L T A I P - - - - I I S P S N S G E E - - - - Q V I S S N S S P L
gm028649_Glyma1    I Q R R K I L P A T - P P T R A T A T A A V L S P L P L S T I P P A K L I V S P S N S A E E - - - - Q V I S S N S S P A
 
AT5G62020.1     Y C H Q T K T T G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y V G S Q P T D R
pt026513_POPTR_    - - - - - - - - - - P G L S L E L L D E N E R L R K E N V R L K G E L T E M K S L C G N I F S L V S D F E S L R E E E E
gm054819_Glyma2    R A - - - - - - - - - - - P V E L L D E N E R L R K E N I L L T K E L V K M R S L C N N I F N L M S N Y A N - - - - - -
gm045241_Glyma1    R A - - - - - - - - - - - P A E L L D E N E R L R K E N V Q L T K E L A E M R S L C N N I Y S L M S S Y G N K N G N S N
gm028649_Glyma1    - - - - - - - - - - - - - - - E L L D E N D R L R K E N I L L T K E L E E M R S L C N N I F N L M S N Y A N - - - - - -
 
AT5G62020.1     - - S Y S P G G S S S Q - - - - - - - - - - - - P M E F L P A K R F S E M E I E E E E E A - - - - - - S P R L F G V P I
pt026513_POPTR_    - - - - - - - - - - - - - - - - - - - E E V R K V L D L L P M K - - - - - - - - E E V G D - - - - - - G A R I F G V E V
gm054819_Glyma2    - - A Q A D G S S A A A - - - - - - - - - - - - - - - - - - A K R C S G E D A V E E M - - - - - - - - N P K L F G V A I
gm045241_Glyma1    G S Y Q T D G G A G G A Q G S R E S G M T A V K P L D L M P V K R S S G E D A A D T V P K E I N L I P N P K L F G V A I
gm028649_Glyma1    - - V Q A D G G S A G V - - - - - - - - - - - - - - - - - - A A R C F G E D A V E E M - - - - - - - - N P K L F G V V I
 
AT5G62020.1     G L K R T R S E G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V Q V K T T A V - - V G E N S D E E T P W
pt026513_POPTR_    G V K R G R E L S G - - - - - - - - - - - D M E V E E D G M Q L R L R Q P G G G S S D G V K I E V N G S R N G D R - - -
gm054819_Glyma2    G K K R A R E E E G - - - - - - - - - - - - H G A K Y D T A - L S L H Q P F H A D V K S E A L D L P G R G E N K K T P W
gm045241_Glyma1    G A K R A R E G G G G S G S G R D C G G G G G G G E E D T L - L R L H H V G S A D V K S E P L D C Q N H R E N Q E T P W
gm028649_Glyma1    G T K R A R E E N - - - - - - - - - - - - - - - - - - D T V - L S L H Q P F H A D V K S E A L D F A R R G E N K K T P W
 
AT5G62020.1     L R H Y N R T N Q R V C N
pt026513_POPTR_    - - - - - - - - - - - - -
gm054819_Glyma2    L N Q C H R A N Q R V C N
gm045241_Glyma1    L S P C H R T N Q R V C N
gm028649_Glyma1    L N Q C H R A N Q R V C N
 
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