fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029607 EAEVPKLFGVSIGLK in 286/355 AT4G11660.1 not_not 0.435374149 III
Gm029606 EAEVPKLFGVSIGLK in 286/355 AT4G11660.1 not_not 0.435374149 III
Pt028610 SEVSPRLFGVSIGFK in 284/343 AT4G11660.1 not_not 0.418367346 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62020.1     MNSPPVDAMITGES------------------SSQRSIPTPFLTKTFNLVEDSSIDDVIS
gm029607_Glyma1 --MAPLPAEQTGES------------APT---ELQRSIPTPFLTKTYQLVDDPSADDLIS
gm029606_Glyma1 --MAPLPAEQTGES------------APT---ELQRSIPTPFLTKTYQLVDDPSADDLIS
pt028610_POPTR_ --MPPLPVEQTGESPAACGGGAAAGGPPSGSGDSQRSLPTPFLTKTYQLVDDPSVDDLIS
                   .*: .  ****                  . ***:********::**:*.* **:**

AT5G62020.1     WNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRG
gm029607_Glyma1 WNEDGTSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRG
gm029606_Glyma1 WNEDGTSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRG
pt028610_POPTR_ WNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRG
                **:**::****.*::**:*****:******************:*********:** *:**

AT5G62020.1     EKRLLREIQRRKITTTHQTVVAPSSEQRNQTMV---------VSPSNSGEDNNNNQVMSS
gm029607_Glyma1 ERALLRDIQRRKLLPVPPAAAAPAAVTANTVTVAVAAPAVRTVSPTTSGDE----QVLSS
gm029606_Glyma1 ERALLRDIQRRKLLPVPPAAAAPAAVTANTVTVAVAAPAVRTVSPTTSGDE----QVLSS
pt028610_POPTR_ EKALLRDIQRRKI-----STMAASAVTSASVTVAAIPTVARAVSPANSGDD----QGISS
                *: ***:*****:     :. *.::     . *         ***:.**::    * :**

AT5G62020.1     SPSSWYCHQTKTTG-NGGLSV----------ELLEENEKLRSQNIQLNRELTQMKSICDN
gm029607_Glyma1 NSSP-------IAGNNNNNTVHRTTSCTTAPELLEENERLRKENIQLSNELSQLKGLCNN
gm029606_Glyma1 NSSP-------IAGNNNNNTVHRTTSCTTAPELLEENERLRKENIQLSNELSQLKGLCNN
pt028610_POPTR_ TSSPG---GAGTAG--GANSFLRTTSCTTTPEILEENERLRKENSALSHELTQLRGLCNN
                ..*.        :*  .  :.          *:*****:**.:*  *..**:*::.:*:*

AT5G62020.1     IYSLMSNYVG--SQPTDRSYSPGGSS------SQPMEFLPAKRFSEMEI-----------
gm029607_Glyma1 ILSLMTNYASGFSRQQLESSTSAVRTVPVPDGKAPLELLPAKHVSSADDALHVGGAAGAA
gm029606_Glyma1 ILSLMTNYASGFSRQQLESSTSAVRTVPVPDGKAPLELLPAKHVSSADDALHVGGAAGAA
pt028610_POPTR_ IMVLMNNYAS----PQLEGN-SGNSNNNLAEVKAALELLPV-----ADEVAVSGRPRGGA
                *  **.**..       ..  ..  .      . .:*:**.      :            

AT5G62020.1     ------EEEEEASPRLFGVPIGLKRTR-----------------------------SEGV
gm029607_Glyma1 ACATGNAAEAEV-PKLFGVSIGLKRCRTECEAEPEGEDQNQMQTRAQTQSQSSQEPDHGS
gm029606_Glyma1 ACATGNAAEAEV-PKLFGVSIGLKRCRTECEAEPEGEDQNQMQTRAQTQSQSSQEPDHGS
pt028610_POPTR_ A-----ATESEVSPRLFGVSIGFKRVRIDEEEEEEG---NRQQTEGK---------EHES
                        * *. *:****.**:** *                             ..  

AT5G62020.1     QVKTTAVVGE--NSDEETP---WLRHYNRTNQRVCN
gm029607_Glyma1 DVKSEPLDGD--DSDYQDHDPHWLEL----------
gm029606_Glyma1 DVKSEPLDGD--DSDYQDHDPHWLEL----------
pt028610_POPTR_ DVKAEPLDGSSGNSDHQDQ--RWLDLGK--------
                :**: .: *.  :** :     **
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N S P P V D A M I T G E S - - - - - - - - - - - - - - - - - - S S Q R S I P T P F L T K T F N L V E D S S I D D V I S
gm029607_Glyma1    - - M A P L P A E Q T G E S - - - - - - - - - - - - A P T - - - E L Q R S I P T P F L T K T Y Q L V D D P S A D D L I S
gm029606_Glyma1    - - M A P L P A E Q T G E S - - - - - - - - - - - - A P T - - - E L Q R S I P T P F L T K T Y Q L V D D P S A D D L I S
pt028610_POPTR_    - - M P P L P V E Q T G E S P A A C G G G A A A G G P P S G S G D S Q R S L P T P F L T K T Y Q L V D D P S V D D L I S
 
AT5G62020.1     W N E D G S S F I V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G
gm029607_Glyma1    W N E D G T S F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G
gm029606_Glyma1    W N E D G T S F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G
pt028610_POPTR_    W N D D G S T F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G
 
AT5G62020.1     E K R L L R E I Q R R K I T T T H Q T V V A P S S E Q R N Q T M V - - - - - - - - - V S P S N S G E D N N N N Q V M S S
gm029607_Glyma1    E R A L L R D I Q R R K L L P V P P A A A A P A A V T A N T V T V A V A A P A V R T V S P T T S G D E - - - - Q V L S S
gm029606_Glyma1    E R A L L R D I Q R R K L L P V P P A A A A P A A V T A N T V T V A V A A P A V R T V S P T T S G D E - - - - Q V L S S
pt028610_POPTR_    E K A L L R D I Q R R K I - - - - - S T M A A S A V T S A S V T V A A I P T V A R A V S P A N S G D D - - - - Q G I S S
 
AT5G62020.1     S P S S W Y C H Q T K T T G - N G G L S V - - - - - - - - - - E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N
gm029607_Glyma1    N S S P - - - - - - - I A G N N N N N T V H R T T S C T T A P E L L E E N E R L R K E N I Q L S N E L S Q L K G L C N N
gm029606_Glyma1    N S S P - - - - - - - I A G N N N N N T V H R T T S C T T A P E L L E E N E R L R K E N I Q L S N E L S Q L K G L C N N
pt028610_POPTR_    T S S P G - - - G A G T A G - - G A N S F L R T T S C T T T P E I L E E N E R L R K E N S A L S H E L T Q L R G L C N N
 
AT5G62020.1     I Y S L M S N Y V G - - S Q P T D R S Y S P G G S S - - - - - - S Q P M E F L P A K R F S E M E I - - - - - - - - - - -
gm029607_Glyma1    I L S L M T N Y A S G F S R Q Q L E S S T S A V R T V P V P D G K A P L E L L P A K H V S S A D D A L H V G G A A G A A
gm029606_Glyma1    I L S L M T N Y A S G F S R Q Q L E S S T S A V R T V P V P D G K A P L E L L P A K H V S S A D D A L H V G G A A G A A
pt028610_POPTR_    I M V L M N N Y A S - - - - P Q L E G N - S G N S N N N L A E V K A A L E L L P V - - - - - A D E V A V S G R P R G G A
 
AT5G62020.1     - - - - - - E E E E E A S P R L F G V P I G L K R T R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S E G V
gm029607_Glyma1    A C A T G N A A E A E V - P K L F G V S I G L K R C R T E C E A E P E G E D Q N Q M Q T R A Q T Q S Q S S Q E P D H G S
gm029606_Glyma1    A C A T G N A A E A E V - P K L F G V S I G L K R C R T E C E A E P E G E D Q N Q M Q T R A Q T Q S Q S S Q E P D H G S
pt028610_POPTR_    A - - - - - A T E S E V S P R L F G V S I G F K R V R I D E E E E E E G - - - N R Q Q T E G K - - - - - - - - - E H E S
 
AT5G62020.1     Q V K T T A V V G E - - N S D E E T P - - - W L R H Y N R T N Q R V C N
gm029607_Glyma1    D V K S E P L D G D - - D S D Y Q D H D P H W L E L - - - - - - - - - -
gm029606_Glyma1    D V K S E P L D G D - - D S D Y Q D H D P H W L E L - - - - - - - - - -
pt028610_POPTR_    D V K A E P L D G S S G N S D H Q D Q - - R W L D L G K - - - - - - - -
 
0