fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024883 EEMNPKLFGVAIGAK in 253/324 AT5G62020.1 1st_1st 0.477891156 Ia
Pt023495 not found in 301aa AT5G62020.1 1st_1st 0.431972789 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62020.1     MNSPP-V-----DAMIT------GESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGS
pt023495_POPTR_ MSPPPLVEQNSTDTPTT------GGGETSRTIPTPFLTKTYQIVDDHTIDDVVSWNEDGS
gm024883_Glyma0 MAKLP-VEYNG-DCATTASASASAAAESQRSIPTPFLTKTFQLVDDQSIDDVISWNDDGS
                *   * *     *   *      . ..:.*:*********:::*:* :****:***:***

AT5G62020.1     SFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLR
pt023495_POPTR_ SFIVWDPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNESFRRGEKNLLA
gm024883_Glyma0 TFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLC
                :****:** **:*****:******************:***********: *:****.** 

AT5G62020.1     EIQRRKITTTHQTVVA--PSSEQRNQTM------VVSPSNSGEDNNNNQVMSSSPSSWYC
pt023495_POPTR_ NIQRRKIPAVVTAPAAVVPAMVKT------------SSNSSSDE----QVISRSSSP---
gm024883_Glyma0 EIQRRKISSPASSPTA--PATVSVTAPMPLTAIPIISPSNSGEE----QVTSSNSSP---
                :******.:   : .*  *:  .             *...*.::    ** * ..*.   

AT5G62020.1     HQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQ---PTD
pt023495_POPTR_ ---------GLSVDLIDENERLRKENVQLKGELTEMKSLCANIFSLVSTYAN--------
gm024883_Glyma0 ---------A---ELLDENERLRKENVQLTKELAEMRSLCNNIYSLMSNYANANGKGNSN
                         .   :*::***:**.:*:**. **::*:*:* **:**:*.*..        

AT5G62020.1     RSYSPGGSSSQPMEFLPAKRFSEMEIEE--EEEASPRLFGVPIGLKRTR-----------
pt023495_POPTR_ -SREGKGVRKM-LDLLP-MKEEEREGA---------RIFGVEVGVKRGREGSGDMEEGEA
gm024883_Glyma0 GSYKTKGGAGL-LDLMPVMRSSDEDAAEMAPEEMNPKLFGVAIGAKRAREGGGGGDCG-G
                 * .  *     ::::*  : .: :           ::*** :* ** *           

AT5G62020.1     ----------------SEGVQVKTTAVVGENSD----EETPWLRHYNRTNQRVCN
pt023495_POPTR_ EGEEDGMQLQLRQPGCGGGLKIETNGCQDGNSNGGGDQDAPWLEQCHRLNQKMCD
gm024883_Glyma0 GGEEDTL-LRLHHAG-SADVKSEPLDFQNHREN----QKTPWLSPCYRTNQRVCN
                                . .:: :.    . ..:    :.:***    * **::*:
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N S P P - V - - - - - D A M I T - - - - - - G E S S S Q R S I P T P F L T K T F N L V E D S S I D D V I S W N E D G S
pt023495_POPTR_    M S P P P L V E Q N S T D T P T T - - - - - - G G G E T S R T I P T P F L T K T Y Q I V D D H T I D D V V S W N E D G S
gm024883_Glyma0    M A K L P - V E Y N G - D C A T T A S A S A S A A A E S Q R S I P T P F L T K T F Q L V D D Q S I D D V I S W N D D G S
 
AT5G62020.1     S F I V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G E K R L L R
pt023495_POPTR_    S F I V W D P T V F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E S F R R G E K N L L A
gm024883_Glyma0    T F I V W N P T V F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E Y F R R G E K R L L C
 
AT5G62020.1     E I Q R R K I T T T H Q T V V A - - P S S E Q R N Q T M - - - - - - V V S P S N S G E D N N N N Q V M S S S P S S W Y C
pt023495_POPTR_    N I Q R R K I P A V V T A P A A V V P A M V K T - - - - - - - - - - - - S S N S S S D E - - - - Q V I S R S S S P - - -
gm024883_Glyma0    E I Q R R K I S S P A S S P T A - - P A T V S V T A P M P L T A I P I I S P S N S G E E - - - - Q V T S S N S S P - - -
 
AT5G62020.1     H Q T K T T G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y V G S Q - - - P T D
pt023495_POPTR_    - - - - - - - - - G L S V D L I D E N E R L R K E N V Q L K G E L T E M K S L C A N I F S L V S T Y A N - - - - - - - -
gm024883_Glyma0    - - - - - - - - - A - - - E L L D E N E R L R K E N V Q L T K E L A E M R S L C N N I Y S L M S N Y A N A N G K G N S N
 
AT5G62020.1     R S Y S P G G S S S Q P M E F L P A K R F S E M E I E E - - E E E A S P R L F G V P I G L K R T R - - - - - - - - - - -
pt023495_POPTR_    - S R E G K G V R K M - L D L L P - M K E E E R E G A - - - - - - - - - R I F G V E V G V K R G R E G S G D M E E G E A
gm024883_Glyma0    G S Y K T K G G A G L - L D L M P V M R S S D E D A A E M A P E E M N P K L F G V A I G A K R A R E G G G G G D C G - G
 
AT5G62020.1     - - - - - - - - - - - - - - - - S E G V Q V K T T A V V G E N S D - - - - E E T P W L R H Y N R T N Q R V C N
pt023495_POPTR_    E G E E D G M Q L Q L R Q P G C G G G L K I E T N G C Q D G N S N G G G D Q D A P W L E Q C H R L N Q K M C D
gm024883_Glyma0    G G E E D T L - L R L H H A G - S A D V K S E P L D F Q N H R E N - - - - Q K T P W L S P C Y R T N Q R V C N
 
0