fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026513 RSSSPGLSLELLDENE in 165/286 AT5G62020.1 not_1st 0.411564625 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62020.1     MNSP-------------PVDAMITGESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDG
pt026513_POPTR_ MASPLPVEQNSGETPPSPLAAAAGGETS--RSIPTPFLTKTFKIVDDHTIDDVISWNEDG
                * **             *: *   **:*  ************::*:* :***********

AT5G62020.1     SSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLL
pt026513_POPTR_ SSFVVWNPTLFSRDLLPKFFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRKGEKNLL
                ***:***** *::*****.******************:***********: *::***.**

AT5G62020.1     REIQRRK-ITTTHQTVVAPSSEQRNQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTT
pt026513_POPTR_ CEIQRRKLVATVAQVVAAPAAVK----VIKTSSNSSSD---EQVVISTRSS---------
                 ****** ::*. *.*.**:: :    :: :.***..*   :**: *: **         

AT5G62020.1     GNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQPTDRSYSPGGSS
pt026513_POPTR_ -SPGLSLELLDENERLRKENVRLKGELTEMKSLCGNIFSLVSDFESLREEEEE-----EV
                 . ***:***:***:**.:*::*: ***:***:*.**:**:*:: . :  :..     . 

AT5G62020.1     SQPMEFLPAKRFSEMEIEEEEEASPRLFGVPIGLKRTR---------SEGVQVKTTAVVG
pt026513_POPTR_ RKVLDLLPMK--------EEVGDGARIFGVEVGVKRGRELSGDMEVEEDGMQLRLRQPGG
                 : :::** *        **   ..*:*** :*:** *         .:*:*::     *

AT5G62020.1     ENSDE---ETPWLRHYNRTNQRVCN
pt026513_POPTR_ GSSDGVKIEVNGSRNGDR-------
                 .**    *.   *: :*
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N S P - - - - - - - - - - - - - P V D A M I T G E S S S Q R S I P T P F L T K T F N L V E D S S I D D V I S W N E D G
pt026513_POPTR_    M A S P L P V E Q N S G E T P P S P L A A A A G G E T S - - R S I P T P F L T K T F K I V D D H T I D D V I S W N E D G
 
AT5G62020.1     S S F I V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G E K R L L
pt026513_POPTR_    S S F V V W N P T L F S R D L L P K F F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E C F R K G E K N L L
 
AT5G62020.1     R E I Q R R K - I T T T H Q T V V A P S S E Q R N Q T M V V S P S N S G E D N N N N Q V M S S S P S S W Y C H Q T K T T
pt026513_POPTR_    C E I Q R R K L V A T V A Q V V A A P A A V K - - - - V I K T S S N S S S D - - - E Q V V I S T R S S - - - - - - - - -
 
AT5G62020.1     G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y V G S Q P T D R S Y S P G G S S
pt026513_POPTR_    - S P G L S L E L L D E N E R L R K E N V R L K G E L T E M K S L C G N I F S L V S D F E S L R E E E E E - - - - - E V
 
AT5G62020.1     S Q P M E F L P A K R F S E M E I E E E E E A S P R L F G V P I G L K R T R - - - - - - - - - S E G V Q V K T T A V V G
pt026513_POPTR_    R K V L D L L P M K - - - - - - - - E E V G D G A R I F G V E V G V K R G R E L S G D M E V E E D G M Q L R L R Q P G G
 
AT5G62020.1     E N S D E - - - E T P W L R H Y N R T N Q R V C N
pt026513_POPTR_    G S S D G V K I E V N G S R N G D R - - - - - - -
 
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