fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028610 SEVSPRLFGVSIGFK in 284/343 AT4G11660.1 not_not 0.418367346 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62020.1     MNSPPVDAMITGES------------------SSQRSIPTPFLTKTFNLVEDSSIDDVIS
pt028610_POPTR_ --MPPLPVEQTGESPAACGGGAAAGGPPSGSGDSQRSLPTPFLTKTYQLVDDPSVDDLIS
                   **: .  ****                  .****:********::**:*.*:**:**

AT5G62020.1     WNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRG
pt028610_POPTR_ WNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRG
                **:***:****.*::**:*****:******************:*********:** *:**

AT5G62020.1     EKRLLREIQRRKITTTHQTVVAPSSEQ----RNQTMVVSPSNSGEDNNNNQVMSSSP---
pt028610_POPTR_ EKALLRDIQRRKISTMAASAVTSASVTVAAIPTVARAVSPANSGDDQGISS--TSSPGGA
                ** ***:******:*   :.*:.:*       . : .***:***:*:. ..  :***   

AT5G62020.1     -----SSWYCHQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNY
pt028610_POPTR_ GTAGGANSFLRTTSCT----TTPEILEENERLRKENSALSHELTQLRGLCNNIMVLMNNY
                     :. : : *. *     : *:*****:**.:*  *.:****::.:*:**  **.**

AT5G62020.1     VGSQPTDRSYSPGGSSSQ------PMEFLPAKRFSEMEIE---------EEEEASPRLFG
pt028610_POPTR_ ASPQLEGNS---GNSNNNLAEVKAALELLPVA--DEVAVSGRPRGGAAATESEVSPRLFG
                ...*  ..*   *.*..:      .:*:**.   .*: :.          *.*.******

AT5G62020.1     VPIGLKRTR-------------SEGVQ----VKTTAVVGE--NSDEETPWLRHYNRTNQR
pt028610_POPTR_ VSIGFKRVRIDEEEEEEGNRQQTEGKEHESDVKAEPLDGSSGNSDHQ----------DQR
                *.**:**.*             :** :    **: .: *.  ***.:          :**

AT5G62020.1     VCN---
pt028610_POPTR_ WLDLGK
                  :
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N S P P V D A M I T G E S - - - - - - - - - - - - - - - - - - S S Q R S I P T P F L T K T F N L V E D S S I D D V I S
pt028610_POPTR_    - - M P P L P V E Q T G E S P A A C G G G A A A G G P P S G S G D S Q R S L P T P F L T K T Y Q L V D D P S V D D L I S
 
AT5G62020.1     W N E D G S S F I V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G
pt028610_POPTR_    W N D D G S T F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G
 
AT5G62020.1     E K R L L R E I Q R R K I T T T H Q T V V A P S S E Q - - - - R N Q T M V V S P S N S G E D N N N N Q V M S S S P - - -
pt028610_POPTR_    E K A L L R D I Q R R K I S T M A A S A V T S A S V T V A A I P T V A R A V S P A N S G D D Q G I S S - - T S S P G G A
 
AT5G62020.1     - - - - - S S W Y C H Q T K T T G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y
pt028610_POPTR_    G T A G G A N S F L R T T S C T - - - - T T P E I L E E N E R L R K E N S A L S H E L T Q L R G L C N N I M V L M N N Y
 
AT5G62020.1     V G S Q P T D R S Y S P G G S S S Q - - - - - - P M E F L P A K R F S E M E I E - - - - - - - - - E E E E A S P R L F G
pt028610_POPTR_    A S P Q L E G N S - - - G N S N N N L A E V K A A L E L L P V A - - D E V A V S G R P R G G A A A T E S E V S P R L F G
 
AT5G62020.1     V P I G L K R T R - - - - - - - - - - - - - S E G V Q - - - - V K T T A V V G E - - N S D E E T P W L R H Y N R T N Q R
pt028610_POPTR_    V S I G F K R V R I D E E E E E E G N R Q Q T E G K E H E S D V K A E P L D G S S G N S D H Q - - - - - - - - - - D Q R
 
AT5G62020.1     V C N - - -
pt028610_POPTR_    W L D L G K
 
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