fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045241 LIPNPKLFGVAIGAK in 270/348 AT5G62020.1 not_1st 0.474489795 II
Gm054819 EEMNPKLFGVAIGKK in 234/300 AT5G62020.1 not_1st 0.452380952 II
Gm028649 EEMNPKLFGVVIGTK in 229/289 AT5G62020.1 not_1st 0.435374149 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62020.1     MN-SPPVD--------AMITGESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFI
gm045241_Glyma1 MAPPPPVEHNGDSAATASASASAESQRSIPTPFLTKTYQLVDDQSIDDVISWNDDGSTFI
gm028649_Glyma1 MA--PPLEHNG-------VSTSGDSLRSIPTPFLTKTFQLVDDHTIDHVISWNDSGSSFI
gm054819_Glyma2 MA--PPLEHNG-------VSTSGDSQRSIPTPFLTKTYQLVDDHTIDDVISWNDSGSSFI
                *   **::           : ...* ***********::**:* :**.*****:.**:**

AT5G62020.1     VWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQ
gm045241_Glyma1 VWNPTVFARDLLPKFFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDYFRRGEKRLLCEIQ
gm028649_Glyma1 VWNTTAFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRDEKRLLCEIQ
gm054819_Glyma2 VWNTTAFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEIQ
                ***.* **:*****.******************:***********::*:*.***** ***

AT5G62020.1     RRKIT---------TTHQTVVAPSSEQRNQTM--VVSPSNSGEDNNNNQVMSSSPSSWYC
gm045241_Glyma1 RRKISSPAPSP---TAPTTVTVPMPLTAIP----IISPSNSGEE----QVISSNSSPLRA
gm028649_Glyma1 RRKILPAT-PPTRATATAAVLSPLPLSTIPPAKLIVSPSNSAEE----QVISSNSSPA--
gm054819_Glyma2 RRKILSASPPPAGATATVAVPSPLPLSAIPTAKPIVSPSNSAEE----QVLSSNSSPARA
                ****          *:  :*  * .         ::*****.*:    **:**..*.   

AT5G62020.1     HQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGSQPTDR--
gm045241_Glyma1 -----------PAELLDENERLRKENVQLTKELAEMRSLCNNIYSLMSSYGNKNGNSNGS
gm028649_Glyma1 -------------ELLDENDRLRKENILLTKELEEMRSLCNNIFNLMSNYAN--------
gm054819_Glyma2 -----------PVELLDENERLRKENILLTKELVKMRSLCNNIFNLMSNYAN--------
                             ***:**::**.:*: *.:** :*:*:*:**:.***.* .        

AT5G62020.1     SYSPGGSSSQ------------PMEFLPAKRFSEMEIEEEEEA------SPRLFGVPIGL
gm045241_Glyma1 YQTDGGAGGAQGSRESGMTAVKPLDLMPVKRSSGEDAADTVPKEINLIPNPKLFGVAIGA
gm028649_Glyma1 VQADGGSAGV------------------AARCFGEDAVEEM--------NPKLFGVVIGT
gm054819_Glyma2 AQADGSSAAA------------------AKRCSGEDAVEEM--------NPKLFGVAIGK
                  : *.:..                   . *    :  :          .*:**** ** 

AT5G62020.1     KRTRSEG-----------------------------VQVKTTAV--VGENSDEETPWLRH
gm045241_Glyma1 KRAREGGGGSGSGRDCGGGGGGGEEDTLLRLHHVGSADVKSEPLDCQNHRENQETPWLSP
gm028649_Glyma1 KRAREEN------------------DTVLSLHQPFHADVKSEALDFARRGENKKTPWLNQ
gm054819_Glyma2 KRAREEEG------------HGAKYDTALSLHQPFHADVKSEALDLPGRGENKKTPWLNQ
                **:*.                               .:**: .:    . .:::****  

AT5G62020.1     YNRTNQRVCN
gm045241_Glyma1 CHRTNQRVCN
gm028649_Glyma1 CHRANQRVCN
gm054819_Glyma2 CHRANQRVCN
                 :*:******
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N - S P P V D - - - - - - - - A M I T G E S S S Q R S I P T P F L T K T F N L V E D S S I D D V I S W N E D G S S F I
gm045241_Glyma1    M A P P P P V E H N G D S A A T A S A S A S A E S Q R S I P T P F L T K T Y Q L V D D Q S I D D V I S W N D D G S T F I
gm028649_Glyma1    M A - - P P L E H N G - - - - - - - V S T S G D S L R S I P T P F L T K T F Q L V D D H T I D H V I S W N D S G S S F I
gm054819_Glyma2    M A - - P P L E H N G - - - - - - - V S T S G D S Q R S I P T P F L T K T Y Q L V D D H T I D D V I S W N D S G S S F I
 
AT5G62020.1     V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G E K R L L R E I Q
gm045241_Glyma1    V W N P T V F A R D L L P K F F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N D Y F R R G E K R L L C E I Q
gm028649_Glyma1    V W N T T A F A K D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E Y F R R D E K R L L C E I Q
gm054819_Glyma2    V W N T T A F A K D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E Y F R R G E K R L L C E I Q
 
AT5G62020.1     R R K I T - - - - - - - - - T T H Q T V V A P S S E Q R N Q T M - - V V S P S N S G E D N N N N Q V M S S S P S S W Y C
gm045241_Glyma1    R R K I S S P A P S P - - - T A P T T V T V P M P L T A I P - - - - I I S P S N S G E E - - - - Q V I S S N S S P L R A
gm028649_Glyma1    R R K I L P A T - P P T R A T A T A A V L S P L P L S T I P P A K L I V S P S N S A E E - - - - Q V I S S N S S P A - -
gm054819_Glyma2    R R K I L S A S P P P A G A T A T V A V P S P L P L S A I P T A K P I V S P S N S A E E - - - - Q V L S S N S S P A R A
 
AT5G62020.1     H Q T K T T G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y V G S Q P T D R - -
gm045241_Glyma1    - - - - - - - - - - - P A E L L D E N E R L R K E N V Q L T K E L A E M R S L C N N I Y S L M S S Y G N K N G N S N G S
gm028649_Glyma1    - - - - - - - - - - - - - E L L D E N D R L R K E N I L L T K E L E E M R S L C N N I F N L M S N Y A N - - - - - - - -
gm054819_Glyma2    - - - - - - - - - - - P V E L L D E N E R L R K E N I L L T K E L V K M R S L C N N I F N L M S N Y A N - - - - - - - -
 
AT5G62020.1     S Y S P G G S S S Q - - - - - - - - - - - - P M E F L P A K R F S E M E I E E E E E A - - - - - - S P R L F G V P I G L
gm045241_Glyma1    Y Q T D G G A G G A Q G S R E S G M T A V K P L D L M P V K R S S G E D A A D T V P K E I N L I P N P K L F G V A I G A
gm028649_Glyma1    V Q A D G G S A G V - - - - - - - - - - - - - - - - - - A A R C F G E D A V E E M - - - - - - - - N P K L F G V V I G T
gm054819_Glyma2    A Q A D G S S A A A - - - - - - - - - - - - - - - - - - A K R C S G E D A V E E M - - - - - - - - N P K L F G V A I G K
 
AT5G62020.1     K R T R S E G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V Q V K T T A V - - V G E N S D E E T P W L R H
gm045241_Glyma1    K R A R E G G G G S G S G R D C G G G G G G G E E D T L L R L H H V G S A D V K S E P L D C Q N H R E N Q E T P W L S P
gm028649_Glyma1    K R A R E E N - - - - - - - - - - - - - - - - - - D T V L S L H Q P F H A D V K S E A L D F A R R G E N K K T P W L N Q
gm054819_Glyma2    K R A R E E E G - - - - - - - - - - - - H G A K Y D T A L S L H Q P F H A D V K S E A L D L P G R G E N K K T P W L N Q
 
AT5G62020.1     Y N R T N Q R V C N
gm045241_Glyma1    C H R T N Q R V C N
gm028649_Glyma1    C H R A N Q R V C N
gm054819_Glyma2    C H R A N Q R V C N
 
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