fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029607 EAEVPKLFGVSIGLK in 286/355 AT4G11660.1 not_not 0.435374149 III
Gm029606 EAEVPKLFGVSIGLK in 286/355 AT4G11660.1 not_not 0.435374149 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62020.1     MNSPPVDAMITGESSS---QRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTD
gm029607_Glyma1 --MAPLPAEQTGESAPTELQRSIPTPFLTKTYQLVDDPSADDLISWNEDGTSFIVWRPAE
gm029606_Glyma1 --MAPLPAEQTGESAPTELQRSIPTPFLTKTYQLVDDPSADDLISWNEDGTSFIVWRPAE
                   .*: *  ****:.   ************::**:*.* **:*******:*****.*::

AT5G62020.1     FAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKITT
gm029607_Glyma1 FARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERALLRDIQRRKLLP
gm029606_Glyma1 FARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERALLRDIQRRKLLP
                **:*****:******************:*********:** *:***: ***:*****: .

AT5G62020.1     THQTVVAPSSEQRNQTMV---------VSPSNSGED-------------NNNNQVMSSSP
gm029607_Glyma1 VPPAAAAPAAVTANTVTVAVAAPAVRTVSPTTSGDEQVLSSNSSPIAGNNNNNTV-----
gm029606_Glyma1 VPPAAAAPAAVTANTVTVAVAAPAVRTVSPTTSGDEQVLSSNSSPIAGNNNNNTV-----
                .  :..**::   * . *         ***:.**::             **** *     

AT5G62020.1     SSWYCHQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYVGS--
gm029607_Glyma1 -----HRTTSCTT---APELLEENERLRKENIQLSNELSQLKGLCNNILSLMTNYASGFS
gm029606_Glyma1 -----HRTTSCTT---APELLEENERLRKENIQLSNELSQLKGLCNNILSLMTNYASGFS
                     *:*.:  .   : *******:**.:****..**:*:*.:*:** ***:**...  

AT5G62020.1     -QPTDRSYS-------PGGSSSQPMEFLPAKRFSEMEI----------------EEEEEA
gm029607_Glyma1 RQQLESSTSAVRTVPVPDGKA--PLELLPAKHVSSADDALHVGGAAGAAACATGNAAEAE
gm029606_Glyma1 RQQLESSTSAVRTVPVPDGKA--PLELLPAKHVSSADDALHVGGAAGAAACATGNAAEAE
                 *  : * *       *.*.:  *:*:****:.*. :                 :  *  

AT5G62020.1     SPRLFGVPIGLKRTRSE-----------------------------GVQVKTTAVVGENS
gm029607_Glyma1 VPKLFGVSIGLKRCRTECEAEPEGEDQNQMQTRAQTQSQSSQEPDHGSDVKSEPLDGDDS
gm029606_Glyma1 VPKLFGVSIGLKRCRTECEAEPEGEDQNQMQTRAQTQSQSSQEPDHGSDVKSEPLDGDDS
                 *:****.***** *:*                             * :**: .: *::*

AT5G62020.1     D--EETP-WLRHYNRTNQRVCN
gm029607_Glyma1 DYQDHDPHWLEL----------
gm029606_Glyma1 DYQDHDPHWLEL----------
                *  :. * **.
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N S P P V D A M I T G E S S S - - - Q R S I P T P F L T K T F N L V E D S S I D D V I S W N E D G S S F I V W N P T D
gm029607_Glyma1    - - M A P L P A E Q T G E S A P T E L Q R S I P T P F L T K T Y Q L V D D P S A D D L I S W N E D G T S F I V W R P A E
gm029606_Glyma1    - - M A P L P A E Q T G E S A P T E L Q R S I P T P F L T K T Y Q L V D D P S A D D L I S W N E D G T S F I V W R P A E
 
AT5G62020.1     F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G E K R L L R E I Q R R K I T T
gm029607_Glyma1    F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G E R A L L R D I Q R R K L L P
gm029606_Glyma1    F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G E R A L L R D I Q R R K L L P
 
AT5G62020.1     T H Q T V V A P S S E Q R N Q T M V - - - - - - - - - V S P S N S G E D - - - - - - - - - - - - - N N N N Q V M S S S P
gm029607_Glyma1    V P P A A A A P A A V T A N T V T V A V A A P A V R T V S P T T S G D E Q V L S S N S S P I A G N N N N N T V - - - - -
gm029606_Glyma1    V P P A A A A P A A V T A N T V T V A V A A P A V R T V S P T T S G D E Q V L S S N S S P I A G N N N N N T V - - - - -
 
AT5G62020.1     S S W Y C H Q T K T T G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y V G S - -
gm029607_Glyma1    - - - - - H R T T S C T T - - - A P E L L E E N E R L R K E N I Q L S N E L S Q L K G L C N N I L S L M T N Y A S G F S
gm029606_Glyma1    - - - - - H R T T S C T T - - - A P E L L E E N E R L R K E N I Q L S N E L S Q L K G L C N N I L S L M T N Y A S G F S
 
AT5G62020.1     - Q P T D R S Y S - - - - - - - P G G S S S Q P M E F L P A K R F S E M E I - - - - - - - - - - - - - - - - E E E E E A
gm029607_Glyma1    R Q Q L E S S T S A V R T V P V P D G K A - - P L E L L P A K H V S S A D D A L H V G G A A G A A A C A T G N A A E A E
gm029606_Glyma1    R Q Q L E S S T S A V R T V P V P D G K A - - P L E L L P A K H V S S A D D A L H V G G A A G A A A C A T G N A A E A E
 
AT5G62020.1     S P R L F G V P I G L K R T R S E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G V Q V K T T A V V G E N S
gm029607_Glyma1    V P K L F G V S I G L K R C R T E C E A E P E G E D Q N Q M Q T R A Q T Q S Q S S Q E P D H G S D V K S E P L D G D D S
gm029606_Glyma1    V P K L F G V S I G L K R C R T E C E A E P E G E D Q N Q M Q T R A Q T Q S Q S S Q E P D H G S D V K S E P L D G D D S
 
AT5G62020.1     D - - E E T P - W L R H Y N R T N Q R V C N
gm029607_Glyma1    D Y Q D H D P H W L E L - - - - - - - - - -
gm029606_Glyma1    D Y Q D H D P H W L E L - - - - - - - - - -
 
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