fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62020.1 EEASPRLFGVPIGLK at 251/299 in AT5G62020.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024883 EEMNPKLFGVAIGAK in 253/324 AT5G62020.1 1st_1st 0.477891156 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62020.1     MNSPPVD----------AMITGESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSF
gm024883_Glyma0 MAKLPVEYNGDCATTASASASAAAESQRSIPTPFLTKTFQLVDDQSIDDVISWNDDGSTF
                * . **:          *  :. :.**************:**:*.*********:***:*

AT5G62020.1     IVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREI
gm024883_Glyma0 IVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEI
                ****** **:*****:******************:***********::*:******* **

AT5G62020.1     QRRKITTTHQTVVAPSSEQRNQTM------VVSPSNSGEDNNNNQVMSSSPSSWYCHQTK
gm024883_Glyma0 QRRKISSPASSPTAPATVSVTAPMPLTAIPIISPSNSGEE----QVTSSNSS--------
                *****::. .: .**:: . . .*      ::*******:    ** **..*        

AT5G62020.1     TTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSLMSNYV---GSQPTDRSYS
gm024883_Glyma0 -------PAELLDENERLRKENVQLTKELAEMRSLCNNIYSLMSNYANANGKGNSNGSYK
                       ..***:***:**.:*:**.:**::*:*:*:*********.   *.  :: **.

AT5G62020.1     PGGSSSQPMEFLPAKRFSEMEIEE--EEEASPRLFGVPIGLKRTRSEG------------
gm024883_Glyma0 TKGGAGL-LDLMPVMRSSDEDAAEMAPEEMNPKLFGVAIGAKRAREGGGGGDCGGGGEED
                . *.:.  ::::*. * *: :  *   ** .*:****.** **:*. *            

AT5G62020.1     ----------VQVKTTAVVGEN--SDEETPWLRHYNRTNQRVCN
gm024883_Glyma0 TLLRLHHAGSADVKSEPLDFQNHRENQKTPWLSPCYRTNQRVCN
                          .:**: .:  :*  .:::****    ********
BoxShade v3.31 C (beta, 970507) Output
AT5G62020.1     M N S P P V D - - - - - - - - - - A M I T G E S S S Q R S I P T P F L T K T F N L V E D S S I D D V I S W N E D G S S F
gm024883_Glyma0    M A K L P V E Y N G D C A T T A S A S A S A A A E S Q R S I P T P F L T K T F Q L V D D Q S I D D V I S W N D D G S T F
 
AT5G62020.1     I V W N P T D F A K D L L P K H F K H N N F S S F V R Q L N T Y G F K K V V P D R W E F S N D F F K R G E K R L L R E I
gm024883_Glyma0    I V W N P T V F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E Y F R R G E K R L L C E I
 
AT5G62020.1     Q R R K I T T T H Q T V V A P S S E Q R N Q T M - - - - - - V V S P S N S G E D N N N N Q V M S S S P S S W Y C H Q T K
gm024883_Glyma0    Q R R K I S S P A S S P T A P A T V S V T A P M P L T A I P I I S P S N S G E E - - - - Q V T S S N S S - - - - - - - -
 
AT5G62020.1     T T G N G G L S V E L L E E N E K L R S Q N I Q L N R E L T Q M K S I C D N I Y S L M S N Y V - - - G S Q P T D R S Y S
gm024883_Glyma0    - - - - - - - P A E L L D E N E R L R K E N V Q L T K E L A E M R S L C N N I Y S L M S N Y A N A N G K G N S N G S Y K
 
AT5G62020.1     P G G S S S Q P M E F L P A K R F S E M E I E E - - E E E A S P R L F G V P I G L K R T R S E G - - - - - - - - - - - -
gm024883_Glyma0    T K G G A G L - L D L M P V M R S S D E D A A E M A P E E M N P K L F G V A I G A K R A R E G G G G G D C G G G G E E D
 
AT5G62020.1     - - - - - - - - - - V Q V K T T A V V G E N - - S D E E T P W L R H Y N R T N Q R V C N
gm024883_Glyma0    T L L R L H H A G S A D V K S E P L D F Q N H R E N Q K T P W L S P C Y R T N Q R V C N
 
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