fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62165.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050073 not found in 209aa AT2G45660.1 1st_not 0.568681318 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62165.1     MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS
gm050073_Glyma1 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFASS
                ***** :*::**********************:********:::***** **:****:**

AT5G62165.1     DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS
gm050073_Glyma1 SMQDTIERYRRHNRSAQTVNRSDEQNMQHLKQETANLMKKIELLEASKRKLLGEGLGSCS
                .**.******::.:. :* *:..: ::*:****:::::.******  ******:*:.***

AT5G62165.1     LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRGSS
gm050073_Glyma1 LEELQQIEQQLERSVSNVRARKNQVYKEQIDQLKEKERALYAENARLCEQYGIQPQPATK
                *****:*:.**:**:.:** ** *::***:::** **: *  **.:* ::  *:*  .:.

AT5G62165.1     TDQQQEKYKVIDLNLEVETDLFIGLPNRNC
gm050073_Glyma1 DPKEIQPYAESSPSSEVETELFIGLPRSI-
                  :: : *   . . ****:******.
BoxShade v3.31 C (beta, 970507) Output
AT5G62165.1     M V R G K I E M K K I E N A T S R Q V T F S K R R N G L L K K A Y E L S V L C D A Q L S L I I F S Q R G R L Y E F S S S
gm050073_Glyma1    M V R G K T Q M R R I E N A T S R Q V T F S K R R N G L L K K A F E L S V L C D A E V A L I I F S P R G K L Y E F A S S
 
AT5G62165.1     D M Q K T I E R Y R K Y T K D H E T S N H D S Q I H L Q Q L K Q E A S H M I T K I E L L E F H K R K L L G Q G I A S C S
gm050073_Glyma1    S M Q D T I E R Y R R H N R S A Q T V N R S D E Q N M Q H L K Q E T A N L M K K I E L L E A S K R K L L G E G L G S C S
 
AT5G62165.1     L E E L Q E I D S Q L Q R S L G K V R E R K A Q L F K E Q L E K L K A K E K Q L L E E N V K L H Q K N V I N P W R G S S
gm050073_Glyma1    L E E L Q Q I E Q Q L E R S V S N V R A R K N Q V Y K E Q I D Q L K E K E R A L Y A E N A R L C E Q Y G I Q P Q P A T K
 
AT5G62165.1     T D Q Q Q E K Y K V I D L N L E V E T D L F I G L P N R N C
gm050073_Glyma1    D P K E I Q P Y A E S S P S S E V E T E L F I G L P R S I -
 
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