fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045330 not found in 348aa AT5G62260.1 1st_1st 0.393501805 Ib
Pt022794 YAPDGTLALALSPMPI in 111/350 AT5G62260.1 1st_1st 0.413357400 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62260.1     -----MEEKGEISPSGVVTVKGDEALVPRTEFQQNPSFLQFVSPTT-VVTPLP-PPPAP-
gm045330_Glyma1 -----MEERE--IFSSGHAVNLLEA--PHS-FHVALNSVQFSGPTVETPAPAPAPAPAP-
pt022794_POPTR_ MIYEVMEAKEGIAVSSGVTVKAEEA--PDG-FRVA--------PRNENSSPSPNPNPNPN
                     ** :     *.  :*:  **  *   *:          *     :* * * * * 

AT5G62260.1     -----------------SSAPVP---------TTVTPGSATASTGS-DPTKKKRGRPRKY
gm045330_Glyma1 -----------------APAPVP----------VIAP---VMNSGS-TEGKKKRGRPRKY
pt022794_POPTR_ QNNNHNPNPNSNSNSNSNPSPNPDPGQLGAPQVGASP---VSAVGTDTAGKKKRGRPRKY
                                  .:* *            :*   .   *:    **********

AT5G62260.1     APDGSLNPRFLRPTLSPTPISSSIPLSGDYQ-WKRGKAQQQHQPLEFVKKSHKFEYGSPA
gm045330_Glyma1 GPDGK-------VALSPMPISASIPFTGDFSAWKRGRG----KPLESIKKTFKF-YEAGG
pt022794_POPTR_ APDGTL-----ALALSPMPISSSIPLTGDYYAWKRGRG----RPLESVKKQHNYEYES--
                .***.        :*** ***:***::**:  ****:.    :*** :** .:: * :  

AT5G62260.1     PTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGSISNVTLGQ
gm045330_Glyma1 -AGSGDGIAYSVGANFTPHILTVNDGEDVTMKIMSFSQQGYRAICILSANGTISNVTLRQ
pt022794_POPTR_ ---TGDKIAYFVGTNFMPHVITVNAGEDVTMKVMSFSQQGARAICILSANGTISNVTLRQ
                   .   ::  **:** .* :*** *******:*.:**** ********.*:****** *

AT5G62260.1     PTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAGPNGNIFGGGLAGMLIA
gm045330_Glyma1 PTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAGPDGRVMGGGLAGLLVA
pt022794_POPTR_ PTSSGGTLTYEGRFEILSLSGSFMPSENGGTKGRSGGMSVSLAGPDGRVVGGGLAGLLVA
                **.:******************::.:*** **.*:****:*****:*.:.******:*:*

AT5G62260.1     AGPVQVVMGSFIVMHQAEQNQKKKPRVMEAFAPPQPQAPPQLQQQQPPTFTITTVNSTSP
gm045330_Glyma1 AGPVQVVVASFLPGHQLEQQKPKKPRVE---HIISMAAP-------------MHVNPTS-
pt022794_POPTR_ AGPVQVVVGSFLLGHQ-QESKHKKQRIEPALAVIPATIP-------------ATINVIS-
                *******:.**:  ** ::.: ** *:           *               :*  * 

AT5G62260.1     SVNTVEEQKPQAYGGGIVRPMAQMPSSFQNDNSTMNNFTPAYHGYGNMNTGTTHKEEHED
gm045330_Glyma1 ----AAEEIRIGLGG--VKPIM-TPAAFQVD-----------HIFGNGQS----------
pt022794_POPTR_ -----PEEMKGSYGG--VRPIA-IPSPLH-------------------------------
                      *:   . **  *:*:   *:.::                               

AT5G62260.1     EDGGDDDDDSGD------TRSQSHSG---
gm045330_Glyma1 -SGNSASDDSASFPENESNPSHADAGVAC
pt022794_POPTR_ ------GDNPASL-----NPMQA------
                      .*:...      .  ::
BoxShade v3.31 C (beta, 970507) Output
AT5G62260.1     - - - - - M E E K G E I S P S G V V T V K G D E A L V P R T E F Q Q N P S F L Q F V S P T T - V V T P L P - P P P A P -
gm045330_Glyma1    - - - - - M E E R E - - I F S S G H A V N L L E A - - P H S - F H V A L N S V Q F S G P T V E T P A P A P A P A P A P -
pt022794_POPTR_    M I Y E V M E A K E G I A V S S G V T V K A E E A - - P D G - F R V A - - - - - - - - P R N E N S S P S P N P N P N P N
 
AT5G62260.1     - - - - - - - - - - - - - - - - - S S A P V P - - - - - - - - - T T V T P G S A T A S T G S - D P T K K K R G R P R K Y
gm045330_Glyma1    - - - - - - - - - - - - - - - - - A P A P V P - - - - - - - - - - V I A P - - - V M N S G S - T E G K K K R G R P R K Y
pt022794_POPTR_    Q N N N H N P N P N S N S N S N S N P S P N P D P G Q L G A P Q V G A S P - - - V S A V G T D T A G K K K R G R P R K Y
 
AT5G62260.1     A P D G S L N P R F L R P T L S P T P I S S S I P L S G D Y Q - W K R G K A Q Q Q H Q P L E F V K K S H K F E Y G S P A
gm045330_Glyma1    G P D G K - - - - - - - V A L S P M P I S A S I P F T G D F S A W K R G R G - - - - K P L E S I K K T F K F - Y E A G G
pt022794_POPTR_    A P D G T L - - - - - A L A L S P M P I S S S I P L T G D Y Y A W K R G R G - - - - R P L E S V K K Q H N Y E Y E S - -
 
AT5G62260.1     P T P P L P G L S C Y V G A N F T T H Q F T V N G G E D V T M K V M P Y S Q Q G S R A I C I L S A T G S I S N V T L G Q
gm045330_Glyma1    - A G S G D G I A Y S V G A N F T P H I L T V N D G E D V T M K I M S F S Q Q G Y R A I C I L S A N G T I S N V T L R Q
pt022794_POPTR_    - - - T G D K I A Y F V G T N F M P H V I T V N A G E D V T M K V M S F S Q Q G A R A I C I L S A N G T I S N V T L R Q
 
AT5G62260.1     P T N A G G T L T Y E G R F E I L S L S G S F M P T E N G G T K G R A G G M S I S L A G P N G N I F G G G L A G M L I A
gm045330_Glyma1    P T S S G G T L T Y E G R F E I L S L S G S Y I T T E N G L T K S R S G G M S I S L A G P D G R V M G G G L A G L L V A
pt022794_POPTR_    P T S S G G T L T Y E G R F E I L S L S G S F M P S E N G G T K G R S G G M S V S L A G P D G R V V G G G L A G L L V A
 
AT5G62260.1     A G P V Q V V M G S F I V M H Q A E Q N Q K K K P R V M E A F A P P Q P Q A P P Q L Q Q Q Q P P T F T I T T V N S T S P
gm045330_Glyma1    A G P V Q V V V A S F L P G H Q L E Q Q K P K K P R V E - - - H I I S M A A P - - - - - - - - - - - - - M H V N P T S -
pt022794_POPTR_    A G P V Q V V V G S F L L G H Q - Q E S K H K K Q R I E P A L A V I P A T I P - - - - - - - - - - - - - A T I N V I S -
 
AT5G62260.1     S V N T V E E Q K P Q A Y G G G I V R P M A Q M P S S F Q N D N S T M N N F T P A Y H G Y G N M N T G T T H K E E H E D
gm045330_Glyma1    - - - - A A E E I R I G L G G - - V K P I M - T P A A F Q V D - - - - - - - - - - - H I F G N G Q S - - - - - - - - - -
pt022794_POPTR_    - - - - - P E E M K G S Y G G - - V R P I A - I P S P L H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G62260.1     E D G G D D D D D S G D - - - - - - T R S Q S H S G - - -
gm045330_Glyma1    - S G N S A S D D S A S F P E N E S N P S H A D A G V A C
pt022794_POPTR_    - - - - - - G D N P A S L - - - - - N P M Q A - - - - - -
 
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