fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045330 not found in 348aa AT5G62260.1 1st_1st 0.393501805 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62260.1     MEEKGEISPSGVVTVKGDEALVPRTEFQQNPSFLQFVSPTTVVTPLP---PPPAPSSAPV
gm045330_Glyma1 MEER-EIFSSG-HAVNLLEA--PHS-FHVALNSVQFSGP-TVETPAPAPAPAPAPAPAPV
                ***: ** .**  :*:  **  *:: *:   . :** .* ** ** *   *.***:.***

AT5G62260.1     PTTVTPGSATASTGSDPTKKKRGRPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSGDYQ-
gm045330_Glyma1 P-VIAP---VMNSGSTEGKKKRGRPRKYGPDGKV-------ALSPMPISASIPFTGDFSA
                * .::*   . .:**   **********.***.:       :*** ***:***::**:. 

AT5G62260.1     WKRGKAQQQHQPLEFVKKSHKF-EYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTM
gm045330_Glyma1 WKRGRG----KPLESIKKTFKFYEAGGAGSG---DGIAYSVGANFTPHILTVNDGEDVTM
                ****:.    :*** :**:.** * *....     *::  ******.* :***.******

AT5G62260.1     KVMPYSQQGSRAICILSATGSISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGT
gm045330_Glyma1 KIMSFSQQGYRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLT
                *:*.:**** ********.*:****** ***.:******************::.**** *

AT5G62260.1     KGRAGGMSISLAGPNGNIFGGGLAGMLIAAGPVQVVMGSFIVMHQAEQNQKKKPRVMEAF
gm045330_Glyma1 KSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEQQKPKKPRVEHII
                *.*:**********:*.::******:*:********:.**:  ** **:: ***** . :

AT5G62260.1     APPQPQAPPQLQQQQPPTFTITTVNSTSPSVNTVEEQKPQAYGGGIVRPMAQMPSSFQND
gm045330_Glyma1 SMAAPMH----------------VNPTSAA----EEIR---IGLGGVKPI-MTPAAFQVD
                : . *                  **.**.:    ** :    * * *:*:   *::** *

AT5G62260.1     NSTMNNFTPAYHGYGNMNTGTTHKEEHEDEDGGDDDDDSG----DTRSQSHSG-----
gm045330_Glyma1 -----------HIFGNGQS-----------SGNSASDDSASFPENESNPSHADAGVAC
                           * :** ::           .*.. .***.    :  . **:.
BoxShade v3.31 C (beta, 970507) Output
AT5G62260.1     M E E K G E I S P S G V V T V K G D E A L V P R T E F Q Q N P S F L Q F V S P T T V V T P L P - - - P P P A P S S A P V
gm045330_Glyma1    M E E R - E I F S S G - H A V N L L E A - - P H S - F H V A L N S V Q F S G P - T V E T P A P A P A P A P A P A P A P V
 
AT5G62260.1     P T T V T P G S A T A S T G S D P T K K K R G R P R K Y A P D G S L N P R F L R P T L S P T P I S S S I P L S G D Y Q -
gm045330_Glyma1    P - V I A P - - - V M N S G S T E G K K K R G R P R K Y G P D G K V - - - - - - - A L S P M P I S A S I P F T G D F S A
 
AT5G62260.1     W K R G K A Q Q Q H Q P L E F V K K S H K F - E Y G S P A P T P P L P G L S C Y V G A N F T T H Q F T V N G G E D V T M
gm045330_Glyma1    W K R G R G - - - - K P L E S I K K T F K F Y E A G G A G S G - - - D G I A Y S V G A N F T P H I L T V N D G E D V T M
 
AT5G62260.1     K V M P Y S Q Q G S R A I C I L S A T G S I S N V T L G Q P T N A G G T L T Y E G R F E I L S L S G S F M P T E N G G T
gm045330_Glyma1    K I M S F S Q Q G Y R A I C I L S A N G T I S N V T L R Q P T S S G G T L T Y E G R F E I L S L S G S Y I T T E N G L T
 
AT5G62260.1     K G R A G G M S I S L A G P N G N I F G G G L A G M L I A A G P V Q V V M G S F I V M H Q A E Q N Q K K K P R V M E A F
gm045330_Glyma1    K S R S G G M S I S L A G P D G R V M G G G L A G L L V A A G P V Q V V V A S F L P G H Q L E Q Q K P K K P R V E H I I
 
AT5G62260.1     A P P Q P Q A P P Q L Q Q Q Q P P T F T I T T V N S T S P S V N T V E E Q K P Q A Y G G G I V R P M A Q M P S S F Q N D
gm045330_Glyma1    S M A A P M H - - - - - - - - - - - - - - - - V N P T S A A - - - - E E I R - - - I G L G G V K P I - M T P A A F Q V D
 
AT5G62260.1     N S T M N N F T P A Y H G Y G N M N T G T T H K E E H E D E D G G D D D D D S G - - - - D T R S Q S H S G - - - - -
gm045330_Glyma1    - - - - - - - - - - - H I F G N G Q S - - - - - - - - - - - S G N S A S D D S A S F P E N E S N P S H A D A G V A C
 
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