fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003312 not found in 354aa AT5G14340.1 1st_not 0.449023861 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62320.1     MGGRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKS
pp003312_Pp1s43 -MGRKPCCEKVGLKRGPWAADEDKKLVSYINAHGVS-------CWRAIPKLAGLLRCGKS
                  ******::***::***:.:** ***.::.*:* .       *** :****** *****

AT5G62320.1     CRLRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHI
pp003312_Pp1s43 CRLRWTNYLRPDLKRGGFTDAEENLILDLHATLGNRWSKIAMQLPGRTDNEIKNYWNTHL
                **************** **: * :*::**** *********::*******:********:

AT5G62320.1     KRKLIRMGIDPNTHRRFDQQKVN-EEETILVNDPKPLSETE----VSVALKNDTSAVLSG
pp003312_Pp1s43 KKKLCSMGLDPVTHKPVDSACTDGDTETA---DEGNLDSSEGHSGHSKVMENSLASKVSD
                *:**  **:** **: .*.  .: : **    *   *..:*     * .::*. :: :*.

AT5G62320.1     NLNQLADVD---------------------------------------------------
pp003312_Pp1s43 ELAQLKTIDYLGERMDTQKPFPTTCNEIPEQGAISGKSCSLDTTNSFKEHKPDVFVKLEE
                :* **  :*                                                   

AT5G62320.1     -----GDDQPWSFLMEN-----------------------DEGGGGDA---------AGE
pp003312_Pp1s43 GTYTTGPDHMNAIALENHTPLGPNSEGAADSCWLPQEQSLDTAVGGSSFYQEVAVMNGGG
                     * *:  :: :**                       * . **.:         .* 

AT5G62320.1     LTMLLSGDITSSCSSSSSLWMKY-GEFGYEDLELGC------------------------
pp003312_Pp1s43 LFRQLSGFTQSNMATAG--WSTYFGETPGQPSSTGCSISSWNQSFVQPPGVPPSKEIQKL
                *   ***   *. :::.  * .* **   :  . **                        

AT5G62320.1     ---FDV-
pp003312_Pp1s43 AAILDQI
                   :*
BoxShade v3.31 C (beta, 970507) Output
AT5G62320.1     M G G R K P C C D E V G L R K G P W T V E E D G K L V D F L R A R G N C G G G G G G W C W R D V P K L A G L R R C G K S
pp003312_Pp1s43    - M G R K P C C E K V G L K R G P W A A D E D K K L V S Y I N A H G V S - - - - - - - C W R A I P K L A G L L R C G K S
 
AT5G62320.1     C R L R W T N Y L R P D L K R G L F T E E E I Q L V I D L H A R L G N R W S K I A V E L P G R T D N D I K N Y W N T H I
pp003312_Pp1s43    C R L R W T N Y L R P D L K R G G F T D A E E N L I L D L H A T L G N R W S K I A M Q L P G R T D N E I K N Y W N T H L
 
AT5G62320.1     K R K L I R M G I D P N T H R R F D Q Q K V N - E E E T I L V N D P K P L S E T E - - - - V S V A L K N D T S A V L S G
pp003312_Pp1s43    K K K L C S M G L D P V T H K P V D S A C T D G D T E T A - - - D E G N L D S S E G H S G H S K V M E N S L A S K V S D
 
AT5G62320.1     N L N Q L A D V D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp003312_Pp1s43    E L A Q L K T I D Y L G E R M D T Q K P F P T T C N E I P E Q G A I S G K S C S L D T T N S F K E H K P D V F V K L E E
 
AT5G62320.1     - - - - - G D D Q P W S F L M E N - - - - - - - - - - - - - - - - - - - - - - - D E G G G G D A - - - - - - - - - A G E
pp003312_Pp1s43    G T Y T T G P D H M N A I A L E N H T P L G P N S E G A A D S C W L P Q E Q S L D T A V G G S S F Y Q E V A V M N G G G
 
AT5G62320.1     L T M L L S G D I T S S C S S S S S L W M K Y - G E F G Y E D L E L G C - - - - - - - - - - - - - - - - - - - - - - - -
pp003312_Pp1s43    L F R Q L S G F T Q S N M A T A G - - W S T Y F G E T P G Q P S S T G C S I S S W N Q S F V Q P P G V P P S K E I Q K L
 
AT5G62320.1     - - - F D V -
pp003312_Pp1s43    A A I L D Q I
 
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