fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026582 not found in 274aa AT4G22680.1 1st_not 0.483731019 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62320.1     MGGRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKS
pt026582_POPTR_ -MGRQPCCDKLGVKKGPWTAEEDKKLVSFILSHGQC-------CWRAVPKLAGLRRCGKS
                  **:****::*::*****.*** ***.*: ::*:*       *** *************

AT5G62320.1     CRLRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHI
pt026582_POPTR_ CRLRWTNYLRPDLKRGLLNDDEEKLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHI
                *****************:.::* :*****************..*******:***:*****

AT5G62320.1     KRKLIRMGIDPNTHRRFDQQKVNEEETIL--VNDPKPLSETEVSVAL----------KND
pt026582_POPTR_ KKKLIKMGIDPVTHGSLSKQVSPQESTVSCHTNYDQPIINADNQQVLPKICAHASSRTDN
                *:***:***** **  :.:*   :*.*:   .*  :*: ::: . .*          .::

AT5G62320.1     TSAVLSGNLNQLAD-------VDGDDQP-----WSFLMENDEGGGGDAAGELTMLLSGDI
pt026582_POPTR_ SSTTTTPTENSSVDECVGSSEPNNDNDPTMSFIWSEAFLDDSSWNFQATREDYSEFGVSN
                :*:. : . *. .*        :.*::*     **  : :*.. . :*: *    :. . 

AT5G62320.1     TSSCSSSSSLWMK---------YGEFGYEDLELGCFDV----
pt026582_POPTR_ SSSDQDSYSTWFLDCKDLGDEFFGLSCFSDMDLSILDMGGKH
                :** ..* * *:          :*   :.*::*. :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G62320.1     M G G R K P C C D E V G L R K G P W T V E E D G K L V D F L R A R G N C G G G G G G W C W R D V P K L A G L R R C G K S
pt026582_POPTR_    - M G R Q P C C D K L G V K K G P W T A E E D K K L V S F I L S H G Q C - - - - - - - C W R A V P K L A G L R R C G K S
 
AT5G62320.1     C R L R W T N Y L R P D L K R G L F T E E E I Q L V I D L H A R L G N R W S K I A V E L P G R T D N D I K N Y W N T H I
pt026582_POPTR_    C R L R W T N Y L R P D L K R G L L N D D E E K L V I D L H A R L G N R W S K I A A R L P G R T D N E I K N H W N T H I
 
AT5G62320.1     K R K L I R M G I D P N T H R R F D Q Q K V N E E E T I L - - V N D P K P L S E T E V S V A L - - - - - - - - - - K N D
pt026582_POPTR_    K K K L I K M G I D P V T H G S L S K Q V S P Q E S T V S C H T N Y D Q P I I N A D N Q Q V L P K I C A H A S S R T D N
 
AT5G62320.1     T S A V L S G N L N Q L A D - - - - - - - V D G D D Q P - - - - - W S F L M E N D E G G G G D A A G E L T M L L S G D I
pt026582_POPTR_    S S T T T T P T E N S S V D E C V G S S E P N N D N D P T M S F I W S E A F L D D S S W N F Q A T R E D Y S E F G V S N
 
AT5G62320.1     T S S C S S S S S L W M K - - - - - - - - - Y G E F G Y E D L E L G C F D V - - - -
pt026582_POPTR_    S S S D Q D S Y S T W F L D C K D L G D E F F G L S C F S D M D L S I L D M G G K H
 
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