fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010896 not found in 164aa AT1G66230.1 1st_not 0.468546637 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62320.1     MGGRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKS
Sb010896_Sorbi1 -MGRQPCCEKVGLKKGPWTAEEDQKLVTFLLSHGHC-------CWRLVPKLAGLLRCGKS
                  **:***::***:*****.*** *** ** ::*:*       *** ******* *****

AT5G62320.1     CRLRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHI
Sb010896_Sorbi1 CRLRWTNYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHI
                *****************::***  *******:*********..*******:***:*****

AT5G62320.1     KRKLIRMGIDPNTHRRFDQQKVNEEETILVNDPKPLSETEVSVALKNDTSAVLSGNLNQL
Sb010896_Sorbi1 KKKLKKMGIDPVTHR-------------------PLAQP-------------LAPPLTQ-
                *:** :***** ***                   **::.             *:  *.* 

AT5G62320.1     ADVDGDDQPWSFLMENDEGGGGDAAGELTMLLSGDITSSCSSSSSLWMKYGEFGYEDLEL
Sb010896_Sorbi1 -------QP-----------------RLVRFLQ--IESIERFSIEMVYKFV---------
                       **                 .*. :*.  * *    * .:  *:          

AT5G62320.1     GCFDV
Sb010896_Sorbi1 -----
BoxShade v3.31 C (beta, 970507) Output
AT5G62320.1     M G G R K P C C D E V G L R K G P W T V E E D G K L V D F L R A R G N C G G G G G G W C W R D V P K L A G L R R C G K S
Sb010896_Sorbi1    - M G R Q P C C E K V G L K K G P W T A E E D Q K L V T F L L S H G H C - - - - - - - C W R L V P K L A G L L R C G K S
 
AT5G62320.1     C R L R W T N Y L R P D L K R G L F T E E E I Q L V I D L H A R L G N R W S K I A V E L P G R T D N D I K N Y W N T H I
Sb010896_Sorbi1    C R L R W T N Y L R P D L K R G L L S E E E E A L V I D L H A Q L G N R W S K I A A R L P G R T D N E I K N H W N T H I
 
AT5G62320.1     K R K L I R M G I D P N T H R R F D Q Q K V N E E E T I L V N D P K P L S E T E V S V A L K N D T S A V L S G N L N Q L
Sb010896_Sorbi1    K K K L K K M G I D P V T H R - - - - - - - - - - - - - - - - - - - P L A Q P - - - - - - - - - - - - - L A P P L T Q -
 
AT5G62320.1     A D V D G D D Q P W S F L M E N D E G G G G D A A G E L T M L L S G D I T S S C S S S S S L W M K Y G E F G Y E D L E L
Sb010896_Sorbi1    - - - - - - - Q P - - - - - - - - - - - - - - - - - R L V R F L Q - - I E S I E R F S I E M V Y K F V - - - - - - - - -
 
AT5G62320.1     G C F D V
Sb010896_Sorbi1    - - - - -
 
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