fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011325 not found in 271aa AT4G22680.1 1st_not 0.481561822 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62320.1     MGGRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKS
gm011325_Glyma0 -MGRQPCCDKLGVKKGPWTAEEDKKLIKFILTNGQC-------CWRAVPKLAGLRRCGKS
                  **:****::*::*****.*** **:.*: :.*:*       *** *************

AT5G62320.1     CRLRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHI
gm011325_Glyma0 CRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHI
                *****************:** * ******************..*******:***:*****

AT5G62320.1     KRKLIRMGIDPNTHRRFDQQKVNEEETILVNDPKPLSETEVSVALKNDTSAVLSGNLNQL
gm011325_Glyma0 KKKLLKMGIDPVTHEPLNKQ---------------------AAASSQDSSSSPAEHLPQP
                *:**::***** **. :::*                     :.* .:*:*:  : :* * 

AT5G62320.1     ADVDGDDQ---PWSFLMENDEGGGG----DAAGELTMLLSGDITSSCSSSS---SLWM--
gm011325_Glyma0 GN-NLDDQVKETNGVLLNSEENSSSSQAENSSGDDSLLLE----SICSDDSLLNSMWLDE
                .: : ***   . ..*::.:*....    :::*: ::**.    * **..*   *:*:  

AT5G62320.1     --------------------------------------KYG--EFGYEDLELGCFDV---
gm011325_Glyma0 TPLVEALWDTTPNLENTNNNMSLLPSWEENCAWLLDCQDFGIHDFGFNEIEANALQTVGM
                                                      .:*  :**::::* ..::.   

AT5G62320.1     -----
gm011325_Glyma0 KEEGH
BoxShade v3.31 C (beta, 970507) Output
AT5G62320.1     M G G R K P C C D E V G L R K G P W T V E E D G K L V D F L R A R G N C G G G G G G W C W R D V P K L A G L R R C G K S
gm011325_Glyma0    - M G R Q P C C D K L G V K K G P W T A E E D K K L I K F I L T N G Q C - - - - - - - C W R A V P K L A G L R R C G K S
 
AT5G62320.1     C R L R W T N Y L R P D L K R G L F T E E E I Q L V I D L H A R L G N R W S K I A V E L P G R T D N D I K N Y W N T H I
gm011325_Glyma0    C R L R W T N Y L R P D L K R G L L T E A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E I K N H W N T H I
 
AT5G62320.1     K R K L I R M G I D P N T H R R F D Q Q K V N E E E T I L V N D P K P L S E T E V S V A L K N D T S A V L S G N L N Q L
gm011325_Glyma0    K K K L L K M G I D P V T H E P L N K Q - - - - - - - - - - - - - - - - - - - - - A A A S S Q D S S S S P A E H L P Q P
 
AT5G62320.1     A D V D G D D Q - - - P W S F L M E N D E G G G G - - - - D A A G E L T M L L S G D I T S S C S S S S - - - S L W M - -
gm011325_Glyma0    G N - N L D D Q V K E T N G V L L N S E E N S S S S Q A E N S S G D D S L L L E - - - - S I C S D D S L L N S M W L D E
 
AT5G62320.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K Y G - - E F G Y E D L E L G C F D V - - -
gm011325_Glyma0    T P L V E A L W D T T P N L E N T N N N M S L L P S W E E N C A W L L D C Q D F G I H D F G F N E I E A N A L Q T V G M
 
AT5G62320.1     - - - - -
gm011325_Glyma0    K E E G H
 
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