fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023412 PCKKEIDLQYQIPHDHFL in 214/370 AT1G12260.1 1st_not 0.453352769 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62380.1     MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT
pt023412_POPTR_ MNTFTHVPPGFRFHPTDEELVDYYLRKKVNSRRIDVDVIKDVDLYKIEPWDLQELCRIGT
                *::::*:***:**************::**    ::****************:****  **

AT5G62380.1     GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA
pt023412_POPTR_ EEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKQDLIGMRKTLVFYKGRA
                 *:.**********************.:****************:*:*************

AT5G62380.1     PNGQKSDWIMHEYRLETDENGPP--------HEEGWVVCRAFKKKLTTMN----------
pt023412_POPTR_ PNGQKSDWIMHEYRLETDENGTPQASIGRRFYEEGWVVCRVFKKRLPTMRKVSEHESVCW
                *********************.*        :********.***:*.**.          

AT5G62380.1     YNNPRTMMGSSSGQESNWFTQQMDVG------------------NGNYYHLPDLESPRMF
pt023412_POPTR_ YDDQVAFMHDLDSPKQN---SQPDLGYQFPYPCKKEIDLQYQIPHDHFLQLPLLQSPKLL
                *::  ::* . .. :.*   .* *:*                  :.:: :** *:**:::

AT5G62380.1     QGSSSSSLSSLHQNDQDPYGVVL---STINATPTTIMQRDDGHVITNDDDHMIMMNTSTG
pt023412_POPTR_ QPAPTISCNSINA----AYGLDINQASTIQS--STLTQED--HI---QQAHEQSFPSIYG
                * :.: * .*::     .**: :   ***::  :*: *.*  *:   :: *   : :  *

AT5G62380.1     DHHQSGLLVNDDHNDQVMDWQTLDKFVASQLIMSQEEEEVNKDPSDNSSNETFH------
pt023412_POPTR_ SNN-----INEQAVDQVTDWRVLDKFVASQL---SQEDVVKENNHPNASNNIFNTSSIHA
                .::     :*::  *** **:.*********   .:*: *:::   *:**: *:      

AT5G62380.1     ------HLSEEQAATMVSMNASSSSSPCSFYSWAQNTHT
pt023412_POPTR_ PNIFARHLSKQD--TSVPENASTSTSSCQIDLWK-----
                      ***:::  * *. ***:*:*.*.:  *
BoxShade v3.31 C (beta, 970507) Output
AT5G62380.1     M E S L A H I P P G Y R F H P T D E E L V D Y Y L K N K V A F P G M Q V D V I K D V D L Y K I E P W D I Q E L C G R G T
pt023412_POPTR_    M N T F T H V P P G F R F H P T D E E L V D Y Y L R K K V N S R R I D V D V I K D V D L Y K I E P W D L Q E L C R I G T
 
AT5G62380.1     G E E R E W Y F F S H K D K K Y P T G T R T N R A T G S G F W K A T G R D K A I Y S K Q E L V G M R K T L V F Y K G R A
pt023412_POPTR_    E E Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A I Y S K Q D L I G M R K T L V F Y K G R A
 
AT5G62380.1     P N G Q K S D W I M H E Y R L E T D E N G P P - - - - - - - - H E E G W V V C R A F K K K L T T M N - - - - - - - - - -
pt023412_POPTR_    P N G Q K S D W I M H E Y R L E T D E N G T P Q A S I G R R F Y E E G W V V C R V F K K R L P T M R K V S E H E S V C W
 
AT5G62380.1     Y N N P R T M M G S S S G Q E S N W F T Q Q M D V G - - - - - - - - - - - - - - - - - - N G N Y Y H L P D L E S P R M F
pt023412_POPTR_    Y D D Q V A F M H D L D S P K Q N - - - S Q P D L G Y Q F P Y P C K K E I D L Q Y Q I P H D H F L Q L P L L Q S P K L L
 
AT5G62380.1     Q G S S S S S L S S L H Q N D Q D P Y G V V L - - - S T I N A T P T T I M Q R D D G H V I T N D D D H M I M M N T S T G
pt023412_POPTR_    Q P A P T I S C N S I N A - - - - A Y G L D I N Q A S T I Q S - - S T L T Q E D - - H I - - - Q Q A H E Q S F P S I Y G
 
AT5G62380.1     D H H Q S G L L V N D D H N D Q V M D W Q T L D K F V A S Q L I M S Q E E E E V N K D P S D N S S N E T F H - - - - - -
pt023412_POPTR_    S N N - - - - - I N E Q A V D Q V T D W R V L D K F V A S Q L - - - S Q E D V V K E N N H P N A S N N I F N T S S I H A
 
AT5G62380.1     - - - - - - H L S E E Q A A T M V S M N A S S S S S P C S F Y S W A Q N T H T
pt023412_POPTR_    P N I F A R H L S K Q D - - T S V P E N A S T S T S S C Q I D L W K - - - - -
 
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