fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008987 not found in 275aa AT1G12260.1 1st_not 0.400874635 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62380.1     MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT
Os008987_Os02t0 MDTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQEKCKIGM
                *::::*:***:**************::***   :::***************:** *  * 

AT5G62380.1     GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA
Os008987_Os02t0 EEQNDWYFFSHKDKKYPTGTRTNRATGAGFWKATGRDKPIYARSCLVGMRKTLVFYKGRA
                 *:.:**********************:**********.**::. ***************

AT5G62380.1     PNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNW
Os008987_Os02t0 PNGQKSDWIMHEYRLETNENGTTPEEGWVVCRVFKKRVATVR----RMADGSPC-----W
                *****************:***.. ********.***:::*:.    *   **..     *

AT5G62380.1     FTQQMDVGNGNYYHLPDLESPRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQR
Os008987_Os02t0 FDDHGAV------------------GASCSRCT-----------VTASRSWSTTTSCRRR
                * ::  *                  *:*.*  :           *. *   :*.*:  :*

AT5G62380.1     DDGHVITNDDDHMIMMNTSTGDHHQSGLLVNDDHNDQVMDWQ-----------------T
Os008987_Os02t0 PSCSIF--------------------------------LSWRAPSRRRRLLRRRPTLAAT
                 .  ::                                :.*:                 *

AT5G62380.1     LDKFVASQLIMSQEEEEVNKDPSDNSSNETFHHLSEEQAATMVSMNASSSSSPCSFYSWA
Os008987_Os02t0 SDRRRPPPLLLTTTKPPA---PPRSSSRRRWRLFTWPAPAS-----ASASTRR-------
                 *:  .. *:::  :  .   *. .**.. :: ::   .*:     **:*:         

AT5G62380.1     QNTHT
Os008987_Os02t0 -----
BoxShade v3.31 C (beta, 970507) Output
AT5G62380.1     M E S L A H I P P G Y R F H P T D E E L V D Y Y L K N K V A F P G M Q V D V I K D V D L Y K I E P W D I Q E L C G R G T
Os008987_Os02t0    M D T F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K K I D L D V I K D V D L Y K I E P W D L Q E K C K I G M
 
AT5G62380.1     G E E R E W Y F F S H K D K K Y P T G T R T N R A T G S G F W K A T G R D K A I Y S K Q E L V G M R K T L V F Y K G R A
Os008987_Os02t0    E E Q N D W Y F F S H K D K K Y P T G T R T N R A T G A G F W K A T G R D K P I Y A R S C L V G M R K T L V F Y K G R A
 
AT5G62380.1     P N G Q K S D W I M H E Y R L E T D E N G P P H E E G W V V C R A F K K K L T T M N Y N N P R T M M G S S S G Q E S N W
Os008987_Os02t0    P N G Q K S D W I M H E Y R L E T N E N G T T P E E G W V V C R V F K K R V A T V R - - - - R M A D G S P C - - - - - W
 
AT5G62380.1     F T Q Q M D V G N G N Y Y H L P D L E S P R M F Q G S S S S S L S S L H Q N D Q D P Y G V V L S T I N A T P T T I M Q R
Os008987_Os02t0    F D D H G A V - - - - - - - - - - - - - - - - - - G A S C S R C T - - - - - - - - - - - V T A S R S W S T T T S C R R R
 
AT5G62380.1     D D G H V I T N D D D H M I M M N T S T G D H H Q S G L L V N D D H N D Q V M D W Q - - - - - - - - - - - - - - - - - T
Os008987_Os02t0    P S C S I F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S W R A P S R R R R L L R R R P T L A A T
 
AT5G62380.1     L D K F V A S Q L I M S Q E E E E V N K D P S D N S S N E T F H H L S E E Q A A T M V S M N A S S S S S P C S F Y S W A
Os008987_Os02t0    S D R R R P P P L L L T T T K P P A - - - P P R S S S R R R W R L F T W P A P A S - - - - - A S A S T R R - - - - - - -
 
AT5G62380.1     Q N T H T
Os008987_Os02t0    - - - - -
 
0