fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029683 not found in 450aa AT1G12260.1 1st_not 0.419825072 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62380.1     MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT
Sb029683_Sorbi1 MDAFTHVPPGFRFHPTDEELVDYYLRKKVAMKKIDLDVIKDVDLYKIEPWDLQEKCRIGA
                *::::*:***:**************::***:  :::***************:** *  *:

AT5G62380.1     GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA
Sb029683_Sorbi1 EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYVKNCLVGMRKTLVFYKGRA
                 *:.********************** :**********.** *: ***************

AT5G62380.1     PNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNW
Sb029683_Sorbi1 PNGQKSDWIMHEYRLETNENGIPHEEGWVVCRVFRKRLATV-----QRMVGDS----PYW
                *****************:*** **********.*:*:*:*:     : *:*.*    . *

AT5G62380.1     FTQQMDVGNGNYYHLPDLESPRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTT-IMQ
Sb029683_Sorbi1 FNDHAG------FMPPELGSPRQAAHHQQSAMMYHRQQSSYPCKVELEYHHLLPQEHFLQ
                *.:: .      :  *:* ***     ..*::   :*:.. *  * *.  :  *   ::*

AT5G62380.1     R---------DD--GHVITNDDDHMIMMNTSTGDHH---------QSGLLVNDDHNDQVM
Sb029683_Sorbi1 QLPPLESPKLPDLIGQV-----DATLQPCGLTPEHGLVRYTVQELQAEPLYLTARNVSGT
                :          *  *:*     *  :     * :*          *:  *    :* .  

AT5G62380.1     DWQTLDKFVASQLIMSQEEEEVNKDPSDNSSNETFHHLSEEQAATMVSMNASSSSSPC--
Sb029683_Sorbi1 DWRALDKFVASQL---SNDTTLKESTSYSNPTQVFQQSEEKEEA----LDYVSTSASCGG
                **::*********   .::  :::..* ....:.*:: .*:: *    ::  *:*:.*  

AT5G62380.1     --SFYSWAQNTHT
Sb029683_Sorbi1 DNDFWKL------
                  .*:.
BoxShade v3.31 C (beta, 970507) Output
AT5G62380.1     M E S L A H I P P G Y R F H P T D E E L V D Y Y L K N K V A F P G M Q V D V I K D V D L Y K I E P W D I Q E L C G R G T
Sb029683_Sorbi1    M D A F T H V P P G F R F H P T D E E L V D Y Y L R K K V A M K K I D L D V I K D V D L Y K I E P W D L Q E K C R I G A
 
AT5G62380.1     G E E R E W Y F F S H K D K K Y P T G T R T N R A T G S G F W K A T G R D K A I Y S K Q E L V G M R K T L V F Y K G R A
Sb029683_Sorbi1    E E Q N E W Y F F S H K D K K Y P T G T R T N R A T T A G F W K A T G R D K P I Y V K N C L V G M R K T L V F Y K G R A
 
AT5G62380.1     P N G Q K S D W I M H E Y R L E T D E N G P P H E E G W V V C R A F K K K L T T M N Y N N P R T M M G S S S G Q E S N W
Sb029683_Sorbi1    P N G Q K S D W I M H E Y R L E T N E N G I P H E E G W V V C R V F R K R L A T V - - - - - Q R M V G D S - - - - P Y W
 
AT5G62380.1     F T Q Q M D V G N G N Y Y H L P D L E S P R M F Q G S S S S S L S S L H Q N D Q D P Y G V V L S T I N A T P T T - I M Q
Sb029683_Sorbi1    F N D H A G - - - - - - F M P P E L G S P R Q A A H H Q Q S A M M Y H R Q Q S S Y P C K V E L E Y H H L L P Q E H F L Q
 
AT5G62380.1     R - - - - - - - - - D D - - G H V I T N D D D H M I M M N T S T G D H H - - - - - - - - - Q S G L L V N D D H N D Q V M
Sb029683_Sorbi1    Q L P P L E S P K L P D L I G Q V - - - - - D A T L Q P C G L T P E H G L V R Y T V Q E L Q A E P L Y L T A R N V S G T
 
AT5G62380.1     D W Q T L D K F V A S Q L I M S Q E E E E V N K D P S D N S S N E T F H H L S E E Q A A T M V S M N A S S S S S P C - -
Sb029683_Sorbi1    D W R A L D K F V A S Q L - - - S N D T T L K E S T S Y S N P T Q V F Q Q S E E K E E A - - - - L D Y V S T S A S C G G
 
AT5G62380.1     - - S F Y S W A Q N T H T
Sb029683_Sorbi1    D N D F W K L - - - - - -
 
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