fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002781 not found in 339aa AT1G12260.1 not_not 0.406705539 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62380.1     -------MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQ
Sb002781_Sorbi1 MGMSSAQAQTQQLVPPGFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVDLYKIEPWDLQ
                        ::   :***:**************::***   ::::**************:*

AT5G62380.1     ELC---GRGTGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYS--KQELVG
Sb002781_Sorbi1 EKCRLGGPGEEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYANKQRQLVG
                * *   * *  *:.**********************.:**********.**:  :::***

AT5G62380.1     MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRT
Sb002781_Sorbi1 MRKTLVYYKGRAPNGHKSDWIMHEYRLETNENGPPQEEGWVVCRVFKKRLPT--------
                ******:********:*************:*****:********.***:*.*        

AT5G62380.1     MMGSSSGQESN-----WFTQQMDVGNGNYYHLPDLESP---------------RMFQGSS
Sb002781_Sorbi1 -----TRRESDHDAPCWYVDD----DGTFMH--DLNSPMSGLPPHHSIAQLQEQHLQMLN
                     : :**:     *:.::    :*.: *  **:**               : :*  .

AT5G62380.1     SSSLSSLHQNDQDPYGVVLSTINATPTTIMQRDDGHVITNDDDHMIMMNTSTGDHHQSGL
Sb002781_Sorbi1 NSYKRELKLQFQMPSHHIL---NAIPHE-LESPSFHSLLVSPDH----QTKVQHAHQHVQ
                .*   .*: : * *   :*   ** *   ::  . * :  . **    :*.. . **   

AT5G62380.1     LVNDDHN-DQVMDWQTLDKFVASQLIMSQEEEEVNKDPS---DNSSNETFHHLSEEQAAT
Sb002781_Sorbi1 LM--EHAVDQVTDWRVLDKFVASQL---------SNDAAKGVDYTDEGDILQVNEKQ--E
                *:  :*  *** **:.*********         .:*.:   * :.:  : ::.*:*   

AT5G62380.1     MVSMNASSSSSPCSFYSWAQNTHT
Sb002781_Sorbi1 VATDYASTSTSSSQVDPWK-----
                :.:  **:*:*.... .*
BoxShade v3.31 C (beta, 970507) Output
AT5G62380.1     - - - - - - - M E S L A H I P P G Y R F H P T D E E L V D Y Y L K N K V A F P G M Q V D V I K D V D L Y K I E P W D I Q
Sb002781_Sorbi1    M G M S S A Q A Q T Q Q L V P P G F R F H P T D E E L V D Y Y L R K K V A S R R I D L N V I K D V D L Y K I E P W D L Q
 
AT5G62380.1     E L C - - - G R G T G E E R E W Y F F S H K D K K Y P T G T R T N R A T G S G F W K A T G R D K A I Y S - - K Q E L V G
Sb002781_Sorbi1    E K C R L G G P G E E E Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K P I Y A N K Q R Q L V G
 
AT5G62380.1     M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E T D E N G P P H E E G W V V C R A F K K K L T T M N Y N N P R T
Sb002781_Sorbi1    M R K T L V Y Y K G R A P N G H K S D W I M H E Y R L E T N E N G P P Q E E G W V V C R V F K K R L P T - - - - - - - -
 
AT5G62380.1     M M G S S S G Q E S N - - - - - W F T Q Q M D V G N G N Y Y H L P D L E S P - - - - - - - - - - - - - - - R M F Q G S S
Sb002781_Sorbi1    - - - - - T R R E S D H D A P C W Y V D D - - - - D G T F M H - - D L N S P M S G L P P H H S I A Q L Q E Q H L Q M L N
 
AT5G62380.1     S S S L S S L H Q N D Q D P Y G V V L S T I N A T P T T I M Q R D D G H V I T N D D D H M I M M N T S T G D H H Q S G L
Sb002781_Sorbi1    N S Y K R E L K L Q F Q M P S H H I L - - - N A I P H E - L E S P S F H S L L V S P D H - - - - Q T K V Q H A H Q H V Q
 
AT5G62380.1     L V N D D H N - D Q V M D W Q T L D K F V A S Q L I M S Q E E E E V N K D P S - - - D N S S N E T F H H L S E E Q A A T
Sb002781_Sorbi1    L M - - E H A V D Q V T D W R V L D K F V A S Q L - - - - - - - - - S N D A A K G V D Y T D E G D I L Q V N E K Q - - E
 
AT5G62380.1     M V S M N A S S S S S P C S F Y S W A Q N T H T
Sb002781_Sorbi1    V A T D Y A S T S T S S S Q V D P W K - - - - -
 
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