fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029683 not found in 450aa AT1G12260.1 1st_not 0.419825072 II
Sb002781 not found in 339aa AT1G12260.1 not_not 0.406705539 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62380.1     -----MESLAH--IPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQ
Sb029683_Sorbi1 -----MDAFTH--VPPGFRFHPTDEELVDYYLRKKVAMKKIDLDVIKDVDLYKIEPWDLQ
Sb002781_Sorbi1 MGMSSAQAQTQQLVPPGFRFHPTDEELVDYYLRKKVASRRIDLNVIKDVDLYKIEPWDLQ
                      :: ::  :***:**************::***   ::::**************:*

AT5G62380.1     ELCGRGT---GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYS--KQELVG
Sb029683_Sorbi1 EKCRIGA---EEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYV--KNCLVG
Sb002781_Sorbi1 EKCRLGGPGEEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYANKQRQLVG
                * *  *     *:.********************** :**********.**   :. ***

AT5G62380.1     MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRT
Sb029683_Sorbi1 MRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGIPHEEGWVVCRVFRKRLATV-----QR
Sb002781_Sorbi1 MRKTLVYYKGRAPNGHKSDWIMHEYRLETNENGPPQEEGWVVCRVFKKRLPTT-----RR
                ******:********:*************:*** *:********.*:*:*.*      : 

AT5G62380.1     MMGSSSGQESNWFTQQMDVGNGNYYHLPDLESPRMF--QGSSSSSLSSLH-QNDQDPYGV
Sb029683_Sorbi1 MVG-DS---PYWFNDH------AGFMPPELGSPRQA--AHHQQSAMM-YHRQQSSYPCKV
Sb002781_Sorbi1 ESDHDA---PCWYVDD------DGTFMHDLNSPMSGLPPHHSIAQLQEQHLQMLNNSYKR
                  . .:   . *: :.            :* **        . : :   * *  . .   

AT5G62380.1     VLST---------INATPTTIMQRDDGHVITNDD----------DHMIMMNTSTGDHHQS
Sb029683_Sorbi1 ELEYHHLLPQEHFLQQLP-PLESPKLPDLIGQVDATLQPCGLTPEHGL-VRYTVQELQAE
Sb002781_Sorbi1 ELKLQFQMPSHHILNAIPHELESPSFHSLL-----------VSPDHQTKVQHAHQHVQ--
                 *.          ::  *  : . .   ::              :*   :. :  . :  

AT5G62380.1     GLLVNDDHNDQVMDWQTLDKFVASQLIMSQEEEEVNKDPSDNSSNETFHHLSEEQAATMV
Sb029683_Sorbi1 PLYLTARNVSG-TDWRALDKFVASQL----SNDTTLKESTSYSNPTQVFQQSEEKEEALD
Sb002781_Sorbi1 ---LMEHAVDQVTDWRVLDKFVASQL----SNDAA--KGVDYTDEGDILQVNEKQEVATD
                   :     .   **:.*********    .:: .  .  . :.   . : .*::  :  

AT5G62380.1     SMNASSS-SSPCSFYSWAQNTHT
Sb029683_Sorbi1 YVSTSASCGGDNDFWKL------
Sb002781_Sorbi1 YASTSTS-SSQVDPWK-------
                  .:*:* ..  . :.
BoxShade v3.31 C (beta, 970507) Output
AT5G62380.1     - - - - - M E S L A H - - I P P G Y R F H P T D E E L V D Y Y L K N K V A F P G M Q V D V I K D V D L Y K I E P W D I Q
Sb029683_Sorbi1    - - - - - M D A F T H - - V P P G F R F H P T D E E L V D Y Y L R K K V A M K K I D L D V I K D V D L Y K I E P W D L Q
Sb002781_Sorbi1    M G M S S A Q A Q T Q Q L V P P G F R F H P T D E E L V D Y Y L R K K V A S R R I D L N V I K D V D L Y K I E P W D L Q
 
AT5G62380.1     E L C G R G T - - - G E E R E W Y F F S H K D K K Y P T G T R T N R A T G S G F W K A T G R D K A I Y S - - K Q E L V G
Sb029683_Sorbi1    E K C R I G A - - - E E Q N E W Y F F S H K D K K Y P T G T R T N R A T T A G F W K A T G R D K P I Y V - - K N C L V G
Sb002781_Sorbi1    E K C R L G G P G E E E Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K P I Y A N K Q R Q L V G
 
AT5G62380.1     M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E T D E N G P P H E E G W V V C R A F K K K L T T M N Y N N P R T
Sb029683_Sorbi1    M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E T N E N G I P H E E G W V V C R V F R K R L A T V - - - - - Q R
Sb002781_Sorbi1    M R K T L V Y Y K G R A P N G H K S D W I M H E Y R L E T N E N G P P Q E E G W V V C R V F K K R L P T T - - - - - R R
 
AT5G62380.1     M M G S S S G Q E S N W F T Q Q M D V G N G N Y Y H L P D L E S P R M F - - Q G S S S S S L S S L H - Q N D Q D P Y G V
Sb029683_Sorbi1    M V G - D S - - - P Y W F N D H - - - - - - A G F M P P E L G S P R Q A - - A H H Q Q S A M M - Y H R Q Q S S Y P C K V
Sb002781_Sorbi1    E S D H D A - - - P C W Y V D D - - - - - - D G T F M H D L N S P M S G L P P H H S I A Q L Q E Q H L Q M L N N S Y K R
 
AT5G62380.1     V L S T - - - - - - - - - I N A T P T T I M Q R D D G H V I T N D D - - - - - - - - - - D H M I M M N T S T G D H H Q S
Sb029683_Sorbi1    E L E Y H H L L P Q E H F L Q Q L P - P L E S P K L P D L I G Q V D A T L Q P C G L T P E H G L - V R Y T V Q E L Q A E
Sb002781_Sorbi1    E L K L Q F Q M P S H H I L N A I P H E L E S P S F H S L L - - - - - - - - - - - V S P D H Q T K V Q H A H Q H V Q - -
 
AT5G62380.1     G L L V N D D H N D Q V M D W Q T L D K F V A S Q L I M S Q E E E E V N K D P S D N S S N E T F H H L S E E Q A A T M V
Sb029683_Sorbi1    P L Y L T A R N V S G - T D W R A L D K F V A S Q L - - - - S N D T T L K E S T S Y S N P T Q V F Q Q S E E K E E A L D
Sb002781_Sorbi1    - - - L M E H A V D Q V T D W R V L D K F V A S Q L - - - - S N D A A - - K G V D Y T D E G D I L Q V N E K Q E V A T D
 
AT5G62380.1     S M N A S S S - S S P C S F Y S W A Q N T H T
Sb029683_Sorbi1    Y V S T S A S C G G D N D F W K L - - - - - -
Sb002781_Sorbi1    Y A S T S T S - S S Q V D P W K - - - - - - -
 
0