fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009636 not found in 354aa AT1G12260.1 1st_not 0.441690962 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62380.1     MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT
gm009636_Glyma0 MNNFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGA
                *:.::*:***:**************::*::   :::***************:****  *:

AT5G62380.1     GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA
gm009636_Glyma0 EEKNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA
                 *:.**********************.:***************::*:*************

AT5G62380.1     PNGQKSDWIMHEYRLETDENGPP-------------HEEGWVVCRAFKKKLTTMN-----
gm009636_Glyma0 PNGQKSDWIMHEYRLETDDNGAPQANFFKRLILCTFNEEGWVVCRVFKKRLTTMRKLSEH
                ******************:**.*             :********.***:****.     

AT5G62380.1     -----YNNPRTMM----GSSSGQESNWFTQQ--------MDVGNGNYYHLP---DLESPR
gm009636_Glyma0 DSPCWYDDQVSFMQDLDSPKQSSQPNFPYQQFQYPCKKELDFS----YHLPLQLPLENQK
                     *::  ::*    ......:.*:  **        :*..    ****    **. :

AT5G62380.1     MFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQRDDGHVITNDDDHMIMMNTSTGD
gm009636_Glyma0 LFQSAASNSMT--------PYGIEENPNAMQPASIMQQ----------------------
                :**.::*.*::        ***:  ..    *::***:                      

AT5G62380.1     HHQSGLLV--NDDHNDQVMDWQTLDKFVASQLIMSQEEEEVNKDPSDNS-------SNET
gm009636_Glyma0 VQQQNFQVFGNNSNDQQVADWRALDKYVASQL--SQEDASKDHNSYSNADNIFQVKNNST
                 :*..: *  *:.:::** **::***:*****  ***: . :::. .*:       .*.*

AT5G62380.1     FHHLSEEQAATMVSMNASSSSSPCSFYSWAQNTHT
gm009636_Glyma0 IEQLRDLDKEEKMAENASTSTSSCPIDMWK-----
                :.:* : :    :: ***:*:*.*.:  *
BoxShade v3.31 C (beta, 970507) Output
AT5G62380.1     M E S L A H I P P G Y R F H P T D E E L V D Y Y L K N K V A F P G M Q V D V I K D V D L Y K I E P W D I Q E L C G R G T
gm009636_Glyma0    M N N F S H V P P G F R F H P T D E E L V D Y Y L R K K I T S R R I D L D V I K D V D L Y K I E P W D L Q E L C R I G A
 
AT5G62380.1     G E E R E W Y F F S H K D K K Y P T G T R T N R A T G S G F W K A T G R D K A I Y S K Q E L V G M R K T L V F Y K G R A
gm009636_Glyma0    E E K N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A I Y S K H D L I G M R K T L V F Y K G R A
 
AT5G62380.1     P N G Q K S D W I M H E Y R L E T D E N G P P - - - - - - - - - - - - - H E E G W V V C R A F K K K L T T M N - - - - -
gm009636_Glyma0    P N G Q K S D W I M H E Y R L E T D D N G A P Q A N F F K R L I L C T F N E E G W V V C R V F K K R L T T M R K L S E H
 
AT5G62380.1     - - - - - Y N N P R T M M - - - - G S S S G Q E S N W F T Q Q - - - - - - - - M D V G N G N Y Y H L P - - - D L E S P R
gm009636_Glyma0    D S P C W Y D D Q V S F M Q D L D S P K Q S S Q P N F P Y Q Q F Q Y P C K K E L D F S - - - - Y H L P L Q L P L E N Q K
 
AT5G62380.1     M F Q G S S S S S L S S L H Q N D Q D P Y G V V L S T I N A T P T T I M Q R D D G H V I T N D D D H M I M M N T S T G D
gm009636_Glyma0    L F Q S A A S N S M T - - - - - - - - P Y G I E E N P N A M Q P A S I M Q Q - - - - - - - - - - - - - - - - - - - - - -
 
AT5G62380.1     H H Q S G L L V - - N D D H N D Q V M D W Q T L D K F V A S Q L I M S Q E E E E V N K D P S D N S - - - - - - - S N E T
gm009636_Glyma0    V Q Q Q N F Q V F G N N S N D Q Q V A D W R A L D K Y V A S Q L - - S Q E D A S K D H N S Y S N A D N I F Q V K N N S T
 
AT5G62380.1     F H H L S E E Q A A T M V S M N A S S S S S P C S F Y S W A Q N T H T
gm009636_Glyma0    I E Q L R D L D K E E K M A E N A S T S T S S C P I D M W K - - - - -
 
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