fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003833 not found in 322aa AT3G47600.1 1st_not 0.497576736 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62470.2     MGRPPCCEKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY
pt003833_POPTR_ MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNY
                *******:******************************:*** *** *************

AT5G62470.2     LRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKIN
pt003833_POPTR_ LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNFWNTHLKKKLRKL-
                ***********:**** *:******************:********:*********:*: 

AT5G62470.2     ESGEE--DNDGVSSSNTSSQKNHQSTNKGQWERRLQTDINMAKQALCEALSLDKPSSTLS
pt003833_POPTR_ QAGQEGQSRDGLSSTGS------QQISRGQWERRLQTDINMARQALCEALSPGKPSSLLT
                ::*:*  ..**:**:.:      *. .:**************:******** .**** *:

AT5G62470.2     SSSSLPTPVITQQNIRNFSSALLDRCYDPSSSSSSTTTTTTSNTTNPYPSGVYASSAENI
pt003833_POPTR_ G-------------------------LKPSCGYE-----------KPATEPIYASSTENI
                .                          .**.. .           :* .. :****:***

AT5G62470.2     ARLLQDFMKDTPKAL------------TLSSSSPVSETGPLTAAVSEEGGEGFEQSF---
pt003833_POPTR_ SRLLKGWMISGPKQSLKNSTTQNSFIDTAGADSLSSEGTPDKA---DKNGTGLSQAFESL
                :***:.:* . **              * .:.*  **  * .*   ::.* *:.*:*   

AT5G62470.2     FSFNSMDE-----TQNLTQETSFFHDQVIKPEITMDQDHGLISQGSLSLFEKWLFDE---
pt003833_POPTR_ FGFDSFDSSNSDFSQSMSPDTGLFQDES-KPNSS--------AQVPLSLIERWLFDEGAM
                *.*:*:*.     :*.:: :*.:*:*:  **: :        :* .***:*:*****   

AT5G62470.2     QSHEMVGMALAGQEGMF
pt003833_POPTR_ QGKDYINEVTIDEDNLF
                *.:: :. .  .::.:*
BoxShade v3.31 C (beta, 970507) Output
AT5G62470.2     M G R P P C C E K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T H T G L R R C S K S C R L R W T N Y
pt003833_POPTR_    M G R P P C C D K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R A V P T S T G L L R C S K S C R L R W T N Y
 
AT5G62470.2     L R P G I K R G N F T E H E E K T I V H L Q A L L G N R W A A I A S Y L P E R T D N D I K N Y W N T H L K K K L K K I N
pt003833_POPTR_    L R P G I K R G N F T D H E E K M I I H L Q A L L G N R W A A I A S Y L P Q R T D N D I K N F W N T H L K K K L R K L -
 
AT5G62470.2     E S G E E - - D N D G V S S S N T S S Q K N H Q S T N K G Q W E R R L Q T D I N M A K Q A L C E A L S L D K P S S T L S
pt003833_POPTR_    Q A G Q E G Q S R D G L S S T G S - - - - - - Q Q I S R G Q W E R R L Q T D I N M A R Q A L C E A L S P G K P S S L L T
 
AT5G62470.2     S S S S L P T P V I T Q Q N I R N F S S A L L D R C Y D P S S S S S S T T T T T T S N T T N P Y P S G V Y A S S A E N I
pt003833_POPTR_    G - - - - - - - - - - - - - - - - - - - - - - - - - L K P S C G Y E - - - - - - - - - - - K P A T E P I Y A S S T E N I
 
AT5G62470.2     A R L L Q D F M K D T P K A L - - - - - - - - - - - - T L S S S S P V S E T G P L T A A V S E E G G E G F E Q S F - - -
pt003833_POPTR_    S R L L K G W M I S G P K Q S L K N S T T Q N S F I D T A G A D S L S S E G T P D K A - - - D K N G T G L S Q A F E S L
 
AT5G62470.2     F S F N S M D E - - - - - T Q N L T Q E T S F F H D Q V I K P E I T M D Q D H G L I S Q G S L S L F E K W L F D E - - -
pt003833_POPTR_    F G F D S F D S S N S D F S Q S M S P D T G L F Q D E S - K P N S S - - - - - - - - A Q V P L S L I E R W L F D E G A M
 
AT5G62470.2     Q S H E M V G M A L A G Q E G M F
pt003833_POPTR_    Q G K D Y I N E V T I D E D N L F
 
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