fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62470.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015859 not found in 304aa AT3G28910.1 1st_not 0.436187399 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62470.2     MGRPPCCEKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY
Sb015859_Sorbi1 MGRPPCCEKGGVKKGPWTPEEDLVLVSYVQDHGPGNWRAVPTSTGLMRCSKSCRLRWTNY
                ********* ************::****:*:*******:*** *** *************

AT5G62470.2     LRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKIN
Sb015859_Sorbi1 LRPGIKRGNFSDQEEKLIIHLQALLGNRWAAIASYMPERTDNDIKNYWNTHLKKKFTKTG
                **********:::*** *:****************:*******************:.* .

AT5G62470.2     ESGEEDNDGVSSSNTSSQKNHQSTNKGQWERRLQTDINMAKQALCEALSLDKPSSTLSSS
Sb015859_Sorbi1 GGG----------GAEAKSGRCAAPKGQWERRLQTDIHTARQALREALSLD---------
                 .*          .:.::..: :: ************: *:*** ******         

AT5G62470.2     SSLPTPV--------ITQQNIRNFSSALLDRCYDPSSSSSSTTTTTTSNTTNPYPSGVYA
Sb015859_Sorbi1 ---PDPVPPSAKPEQVPQQ--------------PPAPAATQAAGQAT-----------YA
                   * **        :.**               *:.:::.::  :*           **

AT5G62470.2     SSAENIARLLQDFMK---DTPKALTLSSSSPVSETGPLTAAVSEEGGEGFEQSFFSFNS-
Sb015859_Sorbi1 SSAENIARLLEGWMHPGGGSGAAGKVSSGSRSSASS--VSAFS--GDEGASAS----NSG
                **********:.:*:   .:  * .:**.*  * :.  .:*.*  *.** . *    ** 

AT5G62470.2     ----MDETQNLTQETSFFHDQVIKPEITMDQDHGLISQG-SLSLFEKWLFDEQSHE----
Sb015859_Sorbi1 TAVRMPERPTRTSKAV--------------DDAGTAGPGPSFSMLESWLLDDGVGHGDTG
                    * *  . *.::               :* *  . * *:*::*.**:*:   .    

AT5G62470.2     MVGMALAGQEGMF
Sb015859_Sorbi1 LVSVPLGDPCEFF
                :*.:.*..   :*
BoxShade v3.31 C (beta, 970507) Output
AT5G62470.2     M G R P P C C E K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T H T G L R R C S K S C R L R W T N Y
Sb015859_Sorbi1    M G R P P C C E K G G V K K G P W T P E E D L V L V S Y V Q D H G P G N W R A V P T S T G L M R C S K S C R L R W T N Y
 
AT5G62470.2     L R P G I K R G N F T E H E E K T I V H L Q A L L G N R W A A I A S Y L P E R T D N D I K N Y W N T H L K K K L K K I N
Sb015859_Sorbi1    L R P G I K R G N F S D Q E E K L I I H L Q A L L G N R W A A I A S Y M P E R T D N D I K N Y W N T H L K K K F T K T G
 
AT5G62470.2     E S G E E D N D G V S S S N T S S Q K N H Q S T N K G Q W E R R L Q T D I N M A K Q A L C E A L S L D K P S S T L S S S
Sb015859_Sorbi1    G G G - - - - - - - - - - G A E A K S G R C A A P K G Q W E R R L Q T D I H T A R Q A L R E A L S L D - - - - - - - - -
 
AT5G62470.2     S S L P T P V - - - - - - - - I T Q Q N I R N F S S A L L D R C Y D P S S S S S S T T T T T T S N T T N P Y P S G V Y A
Sb015859_Sorbi1    - - - P D P V P P S A K P E Q V P Q Q - - - - - - - - - - - - - - P P A P A A T Q A A G Q A T - - - - - - - - - - - Y A
 
AT5G62470.2     S S A E N I A R L L Q D F M K - - - D T P K A L T L S S S S P V S E T G P L T A A V S E E G G E G F E Q S F F S F N S -
Sb015859_Sorbi1    S S A E N I A R L L E G W M H P G G G S G A A G K V S S G S R S S A S S - - V S A F S - - G D E G A S A S - - - - N S G
 
AT5G62470.2     - - - - M D E T Q N L T Q E T S F F H D Q V I K P E I T M D Q D H G L I S Q G - S L S L F E K W L F D E Q S H E - - - -
Sb015859_Sorbi1    T A V R M P E R P T R T S K A V - - - - - - - - - - - - - - D D A G T A G P G P S F S M L E S W L L D D G V G H G D T G
 
AT5G62470.2     M V G M A L A G Q E G M F
Sb015859_Sorbi1    L V S V P L G D P C E F F
 
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