fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010084 not found in 243aa AT5G62610.1 not_1st 0.420038535 II
Pt024208 not found in 272aa AT5G62610.1 not_1st 0.479768786 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G62610.1     MDPPLVNDSSFSAANPSSYTLSEIWP----FPVNDAVRSGLRLAVNSGRVFTRSEHSGNK
gm010084_Glyma0 MDPPLISDSTFSPA----YSLAEIWPGMPHFP----------------------------
pt024208_POPTR_ MDPPLINEKSFSAANPSSYSLTEIWP----FPPPSSTALGLRMA-----------NLADR
                *****:.:.:**.*    *:*:****    **                            

AT5G62610.1     DVSAAEESTVTDLTAG--WGSRKTRDLNSEDD-SSKMVSSSSSGNELKE-SG-DKKRKLC
gm010084_Glyma0 -----DHSHLTA------TAPTKGKDSTAADE----VLSSTTTANLSNNDSGSNKRMKVG
pt024208_POPTR_ D-GSVDESTVTEQRGGNRNGNRKARDLSSEEDDSSIMVSTTTSAHDLNDLNG--KRRKIS
                     :.* :*        .  * :* .: ::    ::*::::.:  :: .*  *: *: 

AT5G62610.1     GSESGNGDGSMRPEGETSSGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAER
gm010084_Glyma0 GSSFENDG--FKAEAEASS-VGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAER
pt024208_POPTR_ GSRNENND--SRAEIEASS-AANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAER
                **   *..   :.* *:**  ...*.:* ..** *.*  ******:******* ******

AT5G62610.1     ARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGAST
gm010084_Glyma0 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNT
pt024208_POPTR_ ARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMST
                ****:*.*:*. ***::*****:*****.************ **********.***  .*

AT5G62610.1     GPTIGVFPSGDLGTLPIDVHRTIYEQQEANETRV--SQPEWLHMQVDGNFNRTT
gm010084_Glyma0 NPTIDGFPSKDVGTQPFDIAGMVFGSQAARGYAQGSSHPGWLHMQIGGGFETT-
pt024208_POPTR_ SPAIEGLHPKDLGAQPFDATGMIFGPQPTRDYVQG-SQPEWLHMQVGGSFKRAT
                .*:*  : . *:*: *:*    ::  * :.      *:* *****:.*.*: :
BoxShade v3.31 C (beta, 970507) Output
AT5G62610.1     M D P P L V N D S S F S A A N P S S Y T L S E I W P - - - - F P V N D A V R S G L R L A V N S G R V F T R S E H S G N K
gm010084_Glyma0    M D P P L I S D S T F S P A - - - - Y S L A E I W P G M P H F P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt024208_POPTR_    M D P P L I N E K S F S A A N P S S Y S L T E I W P - - - - F P P P S S T A L G L R M A - - - - - - - - - - - N L A D R
 
AT5G62610.1     D V S A A E E S T V T D L T A G - - W G S R K T R D L N S E D D - S S K M V S S S S S G N E L K E - S G - D K K R K L C
gm010084_Glyma0    - - - - - D H S H L T A - - - - - - T A P T K G K D S T A A D E - - - - V L S S T T T A N L S N N D S G S N K R M K V G
pt024208_POPTR_    D - G S V D E S T V T E Q R G G N R N G N R K A R D L S S E E D D S S I M V S T T T S A H D L N D L N G - - K R R K I S
 
AT5G62610.1     G S E S G N G D G S M R P E G E T S S G G G G S K A T E Q K N K P - E P P K - D Y I H V R A R R G Q A T D R H S L A E R
gm010084_Glyma0    G S S F E N D G - - F K A E A E A S S - V G G N K S S E Q S N K P C E A P K P D Y I H V R A R R G Q A T D S H S L A E R
pt024208_POPTR_    G S R N E N N D - - S R A E I E A S S - A A N N K P A E P S S K P S E P P M Q D Y I H V R S R R G Q A T D S H S L A E R
 
AT5G62610.1     A R R E K I S E K M T A L Q D I I P G C N K I I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E V V N S G A S T
gm010084_Glyma0    A R R E K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N S R M N T
pt024208_POPTR_    A R R E R I G E R M K I L Q D L V P G C N K V I G K A L A L D E I I N Y I Q S L Q C Q V E F L S M K L E A V N S R M S T
 
AT5G62610.1     G P T I G V F P S G D L G T L P I D V H R T I Y E Q Q E A N E T R V - - S Q P E W L H M Q V D G N F N R T T
gm010084_Glyma0    N P T I D G F P S K D V G T Q P F D I A G M V F G S Q A A R G Y A Q G S S H P G W L H M Q I G G G F E T T -
pt024208_POPTR_    S P A I E G L H P K D L G A Q P F D A T G M I F G P Q P T R D Y V Q G - S Q P E W L H M Q V G G S F K R A T
 
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