fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024208 not found in 272aa AT5G62610.1 not_1st 0.479768786 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62610.1     MDPPLVNDSSFSAANPSSYTLSEIWPFPVNDAVRSGLRLAVNSGRVFTRSEHSGNKDVSA
pt024208_POPTR_ MDPPLINEKSFSAANPSSYSLTEIWPFPPPSSTALGLRMA-----------NLADRD-GS
                *****:*:.**********:*:******  .:.  ***:*           : .::* .:

AT5G62610.1     AEESTVTDLTAG--WGSRKTRDLNS-EDDSSKMVSSSSSGNELKESGDKKRKLCGSESGN
pt024208_POPTR_ VDESTVTEQRGGNRNGNRKARDLSSEEDDSSIMVSTTTSAHDLNDLNGKRRKISGSRNEN
                .:*****:  .*   *.**:***.* ***** ***:::*.::*:: ..*:**:.**.. *

AT5G62610.1     GDGSMRPEGETSSGGGGSKATEQKNKP-EPP-KDYIHVRARRGQATDRHSLAERARREKI
pt024208_POPTR_ NDS--RAEIEASS-AANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERI
                .*.  *.* *:** ....*.:* ..** *** :******:******* **********:*

AT5G62610.1     SEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTI-G
pt024208_POPTR_ GERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMSTSPAIEG
                .*:*. ***::*****:*****.************ **********.***  **.*:* *

AT5G62610.1     VFPSGDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT
pt024208_POPTR_ LHPK-DLGAQPFDATGMIFGPQPTRDYVQGSQPEWLHMQVGGSFKRAT
                :.*. ***: *:*.   *:  * :.: .: **********.*.*:*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G62610.1     M D P P L V N D S S F S A A N P S S Y T L S E I W P F P V N D A V R S G L R L A V N S G R V F T R S E H S G N K D V S A
pt024208_POPTR_    M D P P L I N E K S F S A A N P S S Y S L T E I W P F P P P S S T A L G L R M A - - - - - - - - - - - N L A D R D - G S
 
AT5G62610.1     A E E S T V T D L T A G - - W G S R K T R D L N S - E D D S S K M V S S S S S G N E L K E S G D K K R K L C G S E S G N
pt024208_POPTR_    V D E S T V T E Q R G G N R N G N R K A R D L S S E E D D S S I M V S T T T S A H D L N D L N G K R R K I S G S R N E N
 
AT5G62610.1     G D G S M R P E G E T S S G G G G S K A T E Q K N K P - E P P - K D Y I H V R A R R G Q A T D R H S L A E R A R R E K I
pt024208_POPTR_    N D S - - R A E I E A S S - A A N N K P A E P S S K P S E P P M Q D Y I H V R S R R G Q A T D S H S L A E R A R R E R I
 
AT5G62610.1     S E K M T A L Q D I I P G C N K I I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E V V N S G A S T G P T I - G
pt024208_POPTR_    G E R M K I L Q D L V P G C N K V I G K A L A L D E I I N Y I Q S L Q C Q V E F L S M K L E A V N S R M S T S P A I E G
 
AT5G62610.1     V F P S G D L G T L P I D V H R T I Y E Q Q E A N E - T R V S Q P E W L H M Q V D G N F N R T T
pt024208_POPTR_    L H P K - D L G A Q P F D A T G M I F G P Q P T R D Y V Q G S Q P E W L H M Q V G G S F K R A T
 
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