fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027007 not found in 274aa AT5G62610.1 1st_1st 0.495183044 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62610.1     MDPPLVNDSSFSAANPSSYTLSEIWPF--PVNDAVRSGLRLAVNSGRVFTRSEHSGNKDV
pt027007_POPTR_ MDPPLINETSFSAANPSSYTLTEIWPFPPPPPSSTRLGLRM-----------DNLADPD-
                *****:*::************:*****  *  .:.* ***:           :: .: * 

AT5G62610.1     SAAEESTVTDLTAGWGS--RKTRDLNSE-DDSSKMVSSSSSGNELKESGDKKRKLCGSES
pt027007_POPTR_ GSLEESTLTDQSSGNGTRIRKTRDFSSEKDDSSKMVSTTTSANDLNDSNGKRRKISGSRS
                .: ****:** ::* *:  *****:.** ********:::*.*:*::*..*:**:.**.*

AT5G62610.1     GNGDGSMRPEGETSSGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARRE
pt027007_POPTR_ ENNDS--RAETEASS-AANNKTAEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARRE
                 *.*.  *.* *:** ....*::**..** **** ************** **********

AT5G62610.1     KISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTI
pt027007_POPTR_ KISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVNSRMNTSPTT
                ****:*. ***::*****:****************** **********.***  .*.** 

AT5G62610.1     GVFPSGDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT
pt027007_POPTR_ EHLHPKDLGAQPFVATGMISGPQPTREYVQGSQSEWLHMQVGGSFERAT
                  : . ***: *: .   *   * :.* .: **.*******.*.*:*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G62610.1     M D P P L V N D S S F S A A N P S S Y T L S E I W P F - - P V N D A V R S G L R L A V N S G R V F T R S E H S G N K D V
pt027007_POPTR_    M D P P L I N E T S F S A A N P S S Y T L T E I W P F P P P P P S S T R L G L R M - - - - - - - - - - - D N L A D P D -
 
AT5G62610.1     S A A E E S T V T D L T A G W G S - - R K T R D L N S E - D D S S K M V S S S S S G N E L K E S G D K K R K L C G S E S
pt027007_POPTR_    G S L E E S T L T D Q S S G N G T R I R K T R D F S S E K D D S S K M V S T T T S A N D L N D S N G K R R K I S G S R S
 
AT5G62610.1     G N G D G S M R P E G E T S S G G G G S K A T E Q K N K P - E P P K - D Y I H V R A R R G Q A T D R H S L A E R A R R E
pt027007_POPTR_    E N N D S - - R A E T E A S S - A A N N K T A E Q S S K P S E P P K Q D Y I H V R A R R G Q A T D S H S L A E R A R R E
 
AT5G62610.1     K I S E K M T A L Q D I I P G C N K I I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E V V N S G A S T G P T I
pt027007_POPTR_    K I S E R M N M L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q C Q V E F L S M K L E A V N S R M N T S P T T
 
AT5G62610.1     G V F P S G D L G T L P I D V H R T I Y E Q Q E A N E - T R V S Q P E W L H M Q V D G N F N R T T
pt027007_POPTR_    E H L H P K D L G A Q P F V A T G M I S G P Q P T R E Y V Q G S Q S E W L H M Q V G G S F E R A T
 
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