fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010084 not found in 243aa AT5G62610.1 not_1st 0.420038535 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62610.1     MDPPLVNDSSFSAANPSSYTLSEIWP----FPVNDAVRSGLRLAVNSGRVFTRSEHSGNK
gm010084_Glyma0 MDPPLISDSTFSPA----YSLAEIWPGMPHFPDHSHL--------------TATAPTKGK
                *****:.**:**.*    *:*:****    ** :. :              * :  : .*

AT5G62610.1     DVSAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGN-ELKESGDKKRKLCGSES
gm010084_Glyma0 DSTAADE--------------------------VLSSTTTANLSNNDSGSNKRMKVGGSS
                * :**:*                          ::**:::.* . ::**.:**   *..*

AT5G62610.1     GNGDGSMRPEGETSSGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARRE
gm010084_Glyma0 FENDG-FKAEAEASS-VGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARRE
                 :.** ::.*.*:**  **.*::**.*** *.** ************** **********

AT5G62610.1     KISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTI
gm010084_Glyma0 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTI
                ****:*. ***::*****:*****************************.***  .*.***

AT5G62610.1     GVFPSGDLGTLPIDVHRTIYEQQEAN--ETRVSQPEWLHMQVDGNFNRTT
gm010084_Glyma0 DGFPSKDVGTQPFDIAGMVFGSQAARGYAQGSSHPGWLHMQIGGGFETT-
                . *** *:** *:*:   :: .* *.      *:* *****:.*.*: *
BoxShade v3.31 C (beta, 970507) Output
AT5G62610.1     M D P P L V N D S S F S A A N P S S Y T L S E I W P - - - - F P V N D A V R S G L R L A V N S G R V F T R S E H S G N K
gm010084_Glyma0    M D P P L I S D S T F S P A - - - - Y S L A E I W P G M P H F P D H S H L - - - - - - - - - - - - - - T A T A P T K G K
 
AT5G62610.1     D V S A A E E S T V T D L T A G W G S R K T R D L N S E D D S S K M V S S S S S G N - E L K E S G D K K R K L C G S E S
gm010084_Glyma0    D S T A A D E - - - - - - - - - - - - - - - - - - - - - - - - - - V L S S T T T A N L S N N D S G S N K R M K V G G S S
 
AT5G62610.1     G N G D G S M R P E G E T S S G G G G S K A T E Q K N K P - E P P K - D Y I H V R A R R G Q A T D R H S L A E R A R R E
gm010084_Glyma0    F E N D G - F K A E A E A S S - V G G N K S S E Q S N K P C E A P K P D Y I H V R A R R G Q A T D S H S L A E R A R R E
 
AT5G62610.1     K I S E K M T A L Q D I I P G C N K I I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E V V N S G A S T G P T I
gm010084_Glyma0    K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N S R M N T N P T I
 
AT5G62610.1     G V F P S G D L G T L P I D V H R T I Y E Q Q E A N - - E T R V S Q P E W L H M Q V D G N F N R T T
gm010084_Glyma0    D G F P S K D V G T Q P F D I A G M V F G S Q A A R G Y A Q G S S H P G W L H M Q I G G G F E T T -
 
0