fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026914 not found in 314aa AT5G62940.1 1st_1st 0.395626242 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62940.1     MGLTSLQVCMD-SDWLQES--ESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAA
pt026914_POPTR_ MGLNSLQVCMDSSDWLQGTINEESG---MDSS--SPS-GDML-TCS-RP-----------
                ***.******* ***** :  *.**   :***  *** .*:* :** **           

AT5G62940.1     LMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP
pt026914_POPTR_ LIE--RRLRPPHDQALKCPRCDSAHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP
                *::  ********:. *****:*:************************************

AT5G62940.1     VGGGCRKNKKPSSSNSSSST---SSGKKPSNIVTANTSDLMALAHSHQNYQHSPLGFSHF
pt026914_POPTR_ VGGGCRKNKKVSKKSNDQSVNQINTGSSSSH----NPTDL------HLSFPDQ-VQLSHL
                ********** *......*.   .:*...*:    *.:**      * .: .. : :**:

AT5G62940.1     GGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKF----------DLMGVNNDNL
pt026914_POPTR_ HNILGSQETLANPN--FMESKYNIGMLENPRPVDFMDSKFEALVGSSRNYDFMG--NGDL
                 .::** .*  : *  *:****.  : :.***:**:****          *:**  *.:*

AT5G62940.1     VMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLM
pt026914_POPTR_ GMVS--GLGDMSHH--------HGLAPNYSGYCSPF-GMSL--DGNSGSFME--TCQRLM
                 **.  . **  **        **:. * ..  . * *:*   :**.*.:*:  ******

AT5G62940.1     LSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKSDGGGYGN
pt026914_POPTR_ LP------YDQGNDHDQ--NPIDVKPNTKLLSLDWQDQGC------------SDVGK-DT
                *.      *:: :**::  . :*****.********:: *            ** *  ..

AT5G62940.1     GGYINGLGSSWNGLMNGYGTSTKTNSLV
pt026914_POPTR_ FGYLNNLG-SWTGMMNGYGSST-TNTLV
                 **:*.** **.*:*****:** **:**
BoxShade v3.31 C (beta, 970507) Output
AT5G62940.1     M G L T S L Q V C M D - S D W L Q E S - - E S S G G S M L D S S T N S P S A A D I L A A C S T R P Q A S A V A V A A A A
pt026914_POPTR_    M G L N S L Q V C M D S S D W L Q G T I N E E S G - - - M D S S - - S P S - G D M L - T C S - R P - - - - - - - - - - -
 
AT5G62940.1     L M D G G R R L R P P H D H P Q K C P R C E S T H T K F C Y Y N N Y S L S Q P R Y F C K T C R R Y W T K G G T L R N I P
pt026914_POPTR_    L I E - - R R L R P P H D Q A L K C P R C D S A H T K F C Y Y N N Y S L S Q P R Y F C K T C R R Y W T K G G T L R N I P
 
AT5G62940.1     V G G G C R K N K K P S S S N S S S S T - - - S S G K K P S N I V T A N T S D L M A L A H S H Q N Y Q H S P L G F S H F
pt026914_POPTR_    V G G G C R K N K K V S K K S N D Q S V N Q I N T G S S S S H - - - - N P T D L - - - - - - H L S F P D Q - V Q L S H L
 
AT5G62940.1     G G M M G S Y S T P E H G N V G F L E S K Y G G L L S Q S P R P I D F L D S K F - - - - - - - - - - D L M G V N N D N L
pt026914_POPTR_    H N I L G S Q E T L A N P N - - F M E S K Y N I G M L E N P R P V D F M D S K F E A L V G S S R N Y D F M G - - N G D L
 
AT5G62940.1     V M V N H G S N G D H H H H H N H H M G L N H G V G L N N N N N N G G F N G I S T G G N G N G G G L M D I S T C Q R L M
pt026914_POPTR_    G M V S - - G L G D M S H H - - - - - - - - H G L A P N Y S G Y C S P F - G M S L - - D G N S G S F M E - - T C Q R L M
 
AT5G62940.1     L S N Y D H H H Y N H Q E D H Q R V A T I M D V K P N P K L L S L D W Q Q D Q C Y S N G G G S G G A G K S D G G G Y G N
pt026914_POPTR_    L P - - - - - - Y D Q G N D H D Q - - N P I D V K P N T K L L S L D W Q D Q G C - - - - - - - - - - - - S D V G K - D T
 
AT5G62940.1     G G Y I N G L G S S W N G L M N G Y G T S T K T N S L V
pt026914_POPTR_    F G Y L N N L G - S W T G M M N G Y G S S T - T N T L V
 
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