Input
| Putative repression domain
|
|
AT5G62940.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt026914 |
not found in 314aa |
AT5G62940.1 |
1st_1st |
0.395626242 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G62940.1 MGLTSLQVCMD-SDWLQES--ESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAA
pt026914_POPTR_ MGLNSLQVCMDSSDWLQGTINEESG---MDSS--SPS-GDML-TCS-RP-----------
***.******* ***** : *.** :*** *** .*:* :** **
AT5G62940.1 LMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP
pt026914_POPTR_ LIE--RRLRPPHDQALKCPRCDSAHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP
*:: ********:. *****:*:************************************
AT5G62940.1 VGGGCRKNKKPSSSNSSSST---SSGKKPSNIVTANTSDLMALAHSHQNYQHSPLGFSHF
pt026914_POPTR_ VGGGCRKNKKVSKKSNDQSVNQINTGSSSSH----NPTDL------HLSFPDQ-VQLSHL
********** *......*. .:*...*: *.:** * .: .. : :**:
AT5G62940.1 GGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKF----------DLMGVNNDNL
pt026914_POPTR_ HNILGSQETLANPN--FMESKYNIGMLENPRPVDFMDSKFEALVGSSRNYDFMG--NGDL
.::** .* : * *:****. : :.***:**:**** *:** *.:*
AT5G62940.1 VMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLM
pt026914_POPTR_ GMVS--GLGDMSHH--------HGLAPNYSGYCSPF-GMSL--DGNSGSFME--TCQRLM
**. . ** ** **:. * .. . * *:* :**.*.:*: ******
AT5G62940.1 LSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKSDGGGYGN
pt026914_POPTR_ LP------YDQGNDHDQ--NPIDVKPNTKLLSLDWQDQGC------------SDVGK-DT
*. *:: :**:: . :*****.********:: * ** * ..
AT5G62940.1 GGYINGLGSSWNGLMNGYGTSTKTNSLV
pt026914_POPTR_ FGYLNNLG-SWTGMMNGYGSST-TNTLV
**:*.** **.*:*****:** **:**
BoxShade v3.31 C (beta, 970507) Output
AT5G62940.1 |
M |
G |
L |
T |
S |
L |
Q |
V |
C |
M |
D |
- |
S |
D |
W |
L |
Q |
E |
S |
- |
- |
E |
S |
S |
G |
G |
S |
M |
L |
D |
S |
S |
T |
N |
S |
P |
S |
A |
A |
D |
I |
L |
A |
A |
C |
S |
T |
R |
P |
Q |
A |
S |
A |
V |
A |
V |
A |
A |
A |
A |
pt026914_POPTR_ |
M |
G |
L |
N |
S |
L |
Q |
V |
C |
M |
D |
S |
S |
D |
W |
L |
Q |
G |
T |
I |
N |
E |
E |
S |
G |
- |
- |
- |
M |
D |
S |
S |
- |
- |
S |
P |
S |
- |
G |
D |
M |
L |
- |
T |
C |
S |
- |
R |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT5G62940.1 |
L |
M |
D |
G |
G |
R |
R |
L |
R |
P |
P |
H |
D |
H |
P |
Q |
K |
C |
P |
R |
C |
E |
S |
T |
H |
T |
K |
F |
C |
Y |
Y |
N |
N |
Y |
S |
L |
S |
Q |
P |
R |
Y |
F |
C |
K |
T |
C |
R |
R |
Y |
W |
T |
K |
G |
G |
T |
L |
R |
N |
I |
P |
pt026914_POPTR_ |
L |
I |
E |
- |
- |
R |
R |
L |
R |
P |
P |
H |
D |
Q |
A |
L |
K |
C |
P |
R |
C |
D |
S |
A |
H |
T |
K |
F |
C |
Y |
Y |
N |
N |
Y |
S |
L |
S |
Q |
P |
R |
Y |
F |
C |
K |
T |
C |
R |
R |
Y |
W |
T |
K |
G |
G |
T |
L |
R |
N |
I |
P |
|
AT5G62940.1 |
V |
G |
G |
G |
C |
R |
K |
N |
K |
K |
P |
S |
S |
S |
N |
S |
S |
S |
S |
T |
- |
- |
- |
S |
S |
G |
K |
K |
P |
S |
N |
I |
V |
T |
A |
N |
T |
S |
D |
L |
M |
A |
L |
A |
H |
S |
H |
Q |
N |
Y |
Q |
H |
S |
P |
L |
G |
F |
S |
H |
F |
pt026914_POPTR_ |
V |
G |
G |
G |
C |
R |
K |
N |
K |
K |
V |
S |
K |
K |
S |
N |
D |
Q |
S |
V |
N |
Q |
I |
N |
T |
G |
S |
S |
S |
S |
H |
- |
- |
- |
- |
N |
P |
T |
D |
L |
- |
- |
- |
- |
- |
- |
H |
L |
S |
F |
P |
D |
Q |
- |
V |
Q |
L |
S |
H |
L |
|
AT5G62940.1 |
G |
G |
M |
M |
G |
S |
Y |
S |
T |
P |
E |
H |
G |
N |
V |
G |
F |
L |
E |
S |
K |
Y |
G |
G |
L |
L |
S |
Q |
S |
P |
R |
P |
I |
D |
F |
L |
D |
S |
K |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
L |
M |
G |
V |
N |
N |
D |
N |
L |
pt026914_POPTR_ |
H |
N |
I |
L |
G |
S |
Q |
E |
T |
L |
A |
N |
P |
N |
- |
- |
F |
M |
E |
S |
K |
Y |
N |
I |
G |
M |
L |
E |
N |
P |
R |
P |
V |
D |
F |
M |
D |
S |
K |
F |
E |
A |
L |
V |
G |
S |
S |
R |
N |
Y |
D |
F |
M |
G |
- |
- |
N |
G |
D |
L |
|
AT5G62940.1 |
V |
M |
V |
N |
H |
G |
S |
N |
G |
D |
H |
H |
H |
H |
H |
N |
H |
H |
M |
G |
L |
N |
H |
G |
V |
G |
L |
N |
N |
N |
N |
N |
N |
G |
G |
F |
N |
G |
I |
S |
T |
G |
G |
N |
G |
N |
G |
G |
G |
L |
M |
D |
I |
S |
T |
C |
Q |
R |
L |
M |
pt026914_POPTR_ |
G |
M |
V |
S |
- |
- |
G |
L |
G |
D |
M |
S |
H |
H |
- |
- |
- |
- |
- |
- |
- |
- |
H |
G |
L |
A |
P |
N |
Y |
S |
G |
Y |
C |
S |
P |
F |
- |
G |
M |
S |
L |
- |
- |
D |
G |
N |
S |
G |
S |
F |
M |
E |
- |
- |
T |
C |
Q |
R |
L |
M |
|
AT5G62940.1 |
L |
S |
N |
Y |
D |
H |
H |
H |
Y |
N |
H |
Q |
E |
D |
H |
Q |
R |
V |
A |
T |
I |
M |
D |
V |
K |
P |
N |
P |
K |
L |
L |
S |
L |
D |
W |
Q |
Q |
D |
Q |
C |
Y |
S |
N |
G |
G |
G |
S |
G |
G |
A |
G |
K |
S |
D |
G |
G |
G |
Y |
G |
N |
pt026914_POPTR_ |
L |
P |
- |
- |
- |
- |
- |
- |
Y |
D |
Q |
G |
N |
D |
H |
D |
Q |
- |
- |
N |
P |
I |
D |
V |
K |
P |
N |
T |
K |
L |
L |
S |
L |
D |
W |
Q |
D |
Q |
G |
C |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
D |
V |
G |
K |
- |
D |
T |
|
AT5G62940.1 |
G |
G |
Y |
I |
N |
G |
L |
G |
S |
S |
W |
N |
G |
L |
M |
N |
G |
Y |
G |
T |
S |
T |
K |
T |
N |
S |
L |
V |
pt026914_POPTR_ |
F |
G |
Y |
L |
N |
N |
L |
G |
- |
S |
W |
T |
G |
M |
M |
N |
G |
Y |
G |
S |
S |
T |
- |
T |
N |
T |
L |
V |
|
|