fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010968 not found in 295aa AT5G62940.1 1st_1st 0.288270377 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62940.1     --MGLTSLQVCMDSDWLQ----ESESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVA
Sb010968_Sorbi1 MMAGAPPMHICMDSDWLKGIVPEEPGMGSS-------SPSAE--LIACP-RPMH---AVA
                   * ..:::*******:    *. . *.*       ****   * **. **     ***

AT5G62940.1     AAALMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLR
Sb010968_Sorbi1 AAAAAD--RRLRPQHDQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLR
                ***  *  ***** **:* **************************************:**

AT5G62940.1     NIPVGGGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSPLGFSHF
Sb010968_Sorbi1 NVPVGGGCRKNKR----------ASAKKPP-------APPMQPRHMAETGLH--LSFS--
                *:**********:          :*.***.       :  *   *  :.  *  *.**  

AT5G62940.1     GGM--MGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKFDLMGVNNDNLVMVNHGSN
Sb010968_Sorbi1 -GMPQLPPPSADPLCSLGLLDWKYDPILT----------------------------GSG
                 **  : . *:    .:*:*: **. :*:                            **.

AT5G62940.1     G-------DHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLML
Sb010968_Sorbi1 GGAAAGSLDGASSEAHFAG-------------AGMLGIP-GGGGSGG------ECHALSA
                *       *    . *. *             .*: **. **.*.**       *: *  

AT5G62940.1     SNY-----DHHH-----YNHQEDHQRVATIMDVKP--NPKLLSLDWQQDQCYSNGGGSGG
Sb010968_Sorbi1 LRYAAGLGEHLQLQGLPFGGRAEHDG----MEVKPPATERLLSLDW-----YSETSRAPE
                 .*     :* :     :. : :*:     *:***  . :******     **: . :  

AT5G62940.1     AGKSDGGGYGNGGYINGLGSSWNGLMNG----YGTSTKTNSLV
Sb010968_Sorbi1 SAISSLGALG----------LWSGMLGGAHQHHGSSAAI----
                :. *. *. *           *.*::.*    :*:*:
BoxShade v3.31 C (beta, 970507) Output
AT5G62940.1     - - M G L T S L Q V C M D S D W L Q - - - - E S E S S G G S M L D S S T N S P S A A D I L A A C S T R P Q A S A V A V A
Sb010968_Sorbi1    M M A G A P P M H I C M D S D W L K G I V P E E P G M G S S - - - - - - - S P S A E - - L I A C P - R P M H - - - A V A
 
AT5G62940.1     A A A L M D G G R R L R P P H D H P Q K C P R C E S T H T K F C Y Y N N Y S L S Q P R Y F C K T C R R Y W T K G G T L R
Sb010968_Sorbi1    A A A A A D - - R R L R P Q H D Q P L K C P R C E S T H T K F C Y Y N N Y S L S Q P R Y F C K T C R R Y W T K G G S L R
 
AT5G62940.1     N I P V G G G C R K N K K P S S S N S S S S T S S G K K P S N I V T A N T S D L M A L A H S H Q N Y Q H S P L G F S H F
Sb010968_Sorbi1    N V P V G G G C R K N K R - - - - - - - - - - A S A K K P P - - - - - - - A P P M Q P R H M A E T G L H - - L S F S - -
 
AT5G62940.1     G G M - - M G S Y S T P E H G N V G F L E S K Y G G L L S Q S P R P I D F L D S K F D L M G V N N D N L V M V N H G S N
Sb010968_Sorbi1    - G M P Q L P P P S A D P L C S L G L L D W K Y D P I L T - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S G
 
AT5G62940.1     G - - - - - - - D H H H H H N H H M G L N H G V G L N N N N N N G G F N G I S T G G N G N G G G L M D I S T C Q R L M L
Sb010968_Sorbi1    G G A A A G S L D G A S S E A H F A G - - - - - - - - - - - - - A G M L G I P - G G G G S G G - - - - - - E C H A L S A
 
AT5G62940.1     S N Y - - - - - D H H H - - - - - Y N H Q E D H Q R V A T I M D V K P - - N P K L L S L D W Q Q D Q C Y S N G G G S G G
Sb010968_Sorbi1    L R Y A A G L G E H L Q L Q G L P F G G R A E H D G - - - - M E V K P P A T E R L L S L D W - - - - - Y S E T S R A P E
 
AT5G62940.1     A G K S D G G G Y G N G G Y I N G L G S S W N G L M N G - - - - Y G T S T K T N S L V
Sb010968_Sorbi1    S A I S S L G A L G - - - - - - - - - - L W S G M L G G A H Q H H G S S A A I - - - -
 
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