fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G62940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010156 not found in 344aa AT5G62940.1 1st_1st 0.369781312 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G62940.1     MGLTSLQVCMDSD--WLQES--ESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAA
gm010156_Glyma0 MGLSSLHVCMDSSDHWLQGTIHEESG---MDSSS-SPS-GDML-TCS-RPMIE-------
                ***:**:*****.  *** :  *.**   :***: *** .*:* :** **  .       

AT5G62940.1     ALMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI
gm010156_Glyma0 ------RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI
                      ********:. *****:*************************************

AT5G62940.1     PVGGGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSH--QNYQHSP---LGF
gm010156_Glyma0 PVGGGCRKNKKVSAKKSND--------HQLVNNNNINQTRPPHHHHPKDLQLSSFPDVQF
                *********** *:.:*..         ::*. *. :    .* *  :: * *.   : *

AT5G62940.1     SHFGGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDF-LDSK-------------FDLM
gm010156_Glyma0 SHLSNLLGTNANPS-----FMEGKYGIGMIENPRPIDFMMESKLEGIIGSGSSSRNFDFF
                **:..::*: :.*.     *:*.***  : :.****** ::**             **::

AT5G62940.1     GVNNDNLVMVNHG---SNGDHHHHHN------HH---------MGLNHGVGLNNNNNNGG
gm010156_Glyma0 GNNDMSMGMASVGLGDMNGATTHQNGLPPNLYHHGLSAFGGMSMSLDHG---NNNNSD--
                * *: .: *.. *    **   *::.      **         *.*:**   ****.:  

AT5G62940.1     FNGISTGGNGNGGGLMDISTCQRLML----SNYDHHHYNHQEDHQRVATIMDVKPNPK-L
gm010156_Glyma0 -------NNGANRYLMD--SCQRLMLPYDVSNEDH---NAQ---------IDVKPNPKQL
                       .** .  ***  :******    ** **   * *         :******* *

AT5G62940.1     LSLDWQQDQCYSNGGGSGGAGKSDGGGYGNGGYINGLGSSWNGLMNGYGTSTKTNSLV
gm010156_Glyma0 LSLEWQDQGC------------SDAGK-DSFGYLNGPG-SWTGMMNGYGSST-THPLV
                ***:**:: *            **.*  .. **:** * **.*:*****:** *:.**
BoxShade v3.31 C (beta, 970507) Output
AT5G62940.1     M G L T S L Q V C M D S D - - W L Q E S - - E S S G G S M L D S S T N S P S A A D I L A A C S T R P Q A S A V A V A A A
gm010156_Glyma0    M G L S S L H V C M D S S D H W L Q G T I H E E S G - - - M D S S S - S P S - G D M L - T C S - R P M I E - - - - - - -
 
AT5G62940.1     A L M D G G R R L R P P H D H P Q K C P R C E S T H T K F C Y Y N N Y S L S Q P R Y F C K T C R R Y W T K G G T L R N I
gm010156_Glyma0    - - - - - - R R L R P P H D Q A L K C P R C D S T H T K F C Y Y N N Y S L S Q P R Y F C K T C R R Y W T K G G T L R N I
 
AT5G62940.1     P V G G G C R K N K K P S S S N S S S S T S S G K K P S N I V T A N T S D L M A L A H S H - - Q N Y Q H S P - - - L G F
gm010156_Glyma0    P V G G G C R K N K K V S A K K S N D - - - - - - - - H Q L V N N N N I N Q T R P P H H H H P K D L Q L S S F P D V Q F
 
AT5G62940.1     S H F G G M M G S Y S T P E H G N V G F L E S K Y G G L L S Q S P R P I D F - L D S K - - - - - - - - - - - - - F D L M
gm010156_Glyma0    S H L S N L L G T N A N P S - - - - - F M E G K Y G I G M I E N P R P I D F M M E S K L E G I I G S G S S S R N F D F F
 
AT5G62940.1     G V N N D N L V M V N H G - - - S N G D H H H H H N - - - - - - H H - - - - - - - - - M G L N H G V G L N N N N N N G G
gm010156_Glyma0    G N N D M S M G M A S V G L G D M N G A T T H Q N G L P P N L Y H H G L S A F G G M S M S L D H G - - - N N N N S D - -
 
AT5G62940.1     F N G I S T G G N G N G G G L M D I S T C Q R L M L - - - - S N Y D H H H Y N H Q E D H Q R V A T I M D V K P N P K - L
gm010156_Glyma0    - - - - - - - N N G A N R Y L M D - - S C Q R L M L P Y D V S N E D H - - - N A Q - - - - - - - - - I D V K P N P K Q L
 
AT5G62940.1     L S L D W Q Q D Q C Y S N G G G S G G A G K S D G G G Y G N G G Y I N G L G S S W N G L M N G Y G T S T K T N S L V
gm010156_Glyma0    L S L E W Q D Q G C - - - - - - - - - - - - S D A G K - D S F G Y L N G P G - S W T G M M N G Y G S S T - T H P L V
 
0