fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp030711 not found in 265aa AT5G63090.4 1st_not 0.525714285 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G63090.1     -----------------------MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEP
pp030711_Pp1s17 MRVVVQERIDGFRDALSTTMKRGMASSS---SSPCAACKFLRRKCTSECVFAPYFPPDQP
                                       *****   .************* . *:*******::*

AT5G63090.1     HKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQV
pp030711_Pp1s17 HKFANVHKIFGASNITKLLNELPMHQREDAVNSLAYEADARVKDPVYGCVGAISVLQRQV
                **************:*******  **************:***:*********** *****

AT5G63090.1     HRLQKELDAANADLAHY-------------GLSTS-------AAGAPG--------NVVD
pp030711_Pp1s17 AQLQNELAIAHSDLARYASAGMVVPSVGQGGASSSLGVGMNLSRGQPNREQMLTREQLMD
                 :**:**  *::***:*             * *:*       : * *.        :::*

AT5G63090.1     LVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGTF--------------LPW
pp030711_Pp1s17 LARDPSHLSREHL----------------MELARGGGGSYETLQALGLSGALGPLGPFPS
                *. :*. *. ::*                 ::.** **** *:              :* 

AT5G63090.1     N--------NGHDQQGGNM-------------------------
pp030711_Pp1s17 NPRPGGESGNRSGGEGGNGGGGGRGGGGGGGASGSNTGGQVTSP
                *        *  . :***
BoxShade v3.31 C (beta, 970507) Output
AT5G63090.1     - - - - - - - - - - - - - - - - - - - - - - - M A S S S N S Y N S P C A A C K F L R R K C M P G C I F A P Y F P P E E P
pp030711_Pp1s17    M R V V V Q E R I D G F R D A L S T T M K R G M A S S S - - - S S P C A A C K F L R R K C T S E C V F A P Y F P P D Q P
 
AT5G63090.1     H K F A N V H K I F G A S N V T K L L N E L L P H Q R E D A V N S L A Y E A E A R V R D P V Y G C V G A I S Y L Q R Q V
pp030711_Pp1s17    H K F A N V H K I F G A S N I T K L L N E L P M H Q R E D A V N S L A Y E A D A R V K D P V Y G C V G A I S V L Q R Q V
 
AT5G63090.1     H R L Q K E L D A A N A D L A H Y - - - - - - - - - - - - - G L S T S - - - - - - - A A G A P G - - - - - - - - N V V D
pp030711_Pp1s17    A Q L Q N E L A I A H S D L A R Y A S A G M V V P S V G Q G G A S S S L G V G M N L S R G Q P N R E Q M L T R E Q L M D
 
AT5G63090.1     L V F Q P Q P L P S Q Q L P P L N P V Y R L S G A S P V M N Q M P R G T G G S Y G T F - - - - - - - - - - - - - - L P W
pp030711_Pp1s17    L A R D P S H L S R E H L - - - - - - - - - - - - - - - - M E L A R G G G G S Y E T L Q A L G L S G A L G P L G P F P S
 
AT5G63090.1     N - - - - - - - - N G H D Q Q G G N M - - - - - - - - - - - - - - - - - - - - - - - - -
pp030711_Pp1s17    N P R P G G E S G N R S G G E G G N G G G G G R G G G G G G G A S G S N T G G Q V T S P
 
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