fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032888 not found in 271aa AT5G40710.1 not_not 0.626637554 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G63280.1     MGRLWESLPVILLLL---VLLLHQSVS-----QGFEESESTRLVNEEVEVSNAPEIHCSR
pt032888_POPTR_ MGLTRKQLTILFLCLCFTVFLQLTSVSSSTSPQGQKETASSSFEHEK-------EVHCSR
                **   :.*.:::* *   *:*   ***     ** :*: *: : :*:       *:****

AT5G63280.1     ERSRAAWQIIQDYLTPFVERERYEIPKNCRLHPDNDLYRDQEHHKVHVDVFEWKCGYCKK
pt032888_POPTR_ ERSRAAWKIIDEYLMPFVEKERYKISSRCRLHPENDLYRDQEQHKMHVDINEWRCGYCKK
                *******:**::** ****:***:*...*****:********:**:***: **:******

AT5G63280.1     SFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVLSSKKPKSKCNPPAVAKNRH
pt032888_POPTR_ TFYEEKYLDKHFDNRHYDLLNVSHSKCLADVCGVLHCDLVLDSAPHKTKCNPAATGRNKH
                :* :**:*****..***:***.:.:*****:**.****:**.*   *:****.*..:*:*

AT5G63280.1     LCESVANSCFPVSQGPSASRLHEHFLRQFCDAHTCTGNDKPFPRGGKKKSGVFYLAISIL
pt032888_POPTR_ LCESLADSCFPVNEGTSALRLNEFFLRQFCDAHTCSGGRKPFSKGGKKETSTLYVIISVL
                ****:*:*****.:*.** **:*.***********:*. ***.:****::..:*: **:*

AT5G63280.1     TLMLLPLFYLLVFLHQREKRSGTQDLRRIIKSGKKTKPS
pt032888_POPTR_ VLMLLALFYIFMYLYLRGIKRGSQGLKHISKSGQKKRS-
                .****.***::::*: *  : *:*.*::* ***:*.:.
BoxShade v3.31 C (beta, 970507) Output
AT5G63280.1     M G R L W E S L P V I L L L L - - - V L L L H Q S V S - - - - - Q G F E E S E S T R L V N E E V E V S N A P E I H C S R
pt032888_POPTR_    M G L T R K Q L T I L F L C L C F T V F L Q L T S V S S S T S P Q G Q K E T A S S S F E H E K - - - - - - - E V H C S R
 
AT5G63280.1     E R S R A A W Q I I Q D Y L T P F V E R E R Y E I P K N C R L H P D N D L Y R D Q E H H K V H V D V F E W K C G Y C K K
pt032888_POPTR_    E R S R A A W K I I D E Y L M P F V E K E R Y K I S S R C R L H P E N D L Y R D Q E Q H K M H V D I N E W R C G Y C K K
 
AT5G63280.1     S F N D E K F L D K H F S T R H Y N L L N T T D T K C L A D L C G A L H C D F V L S S K K P K S K C N P P A V A K N R H
pt032888_POPTR_    T F Y E E K Y L D K H F D N R H Y D L L N V S H S K C L A D V C G V L H C D L V L D S A P H K T K C N P A A T G R N K H
 
AT5G63280.1     L C E S V A N S C F P V S Q G P S A S R L H E H F L R Q F C D A H T C T G N D K P F P R G G K K K S G V F Y L A I S I L
pt032888_POPTR_    L C E S L A D S C F P V N E G T S A L R L N E F F L R Q F C D A H T C S G G R K P F S K G G K K E T S T L Y V I I S V L
 
AT5G63280.1     T L M L L P L F Y L L V F L H Q R E K R S G T Q D L R R I I K S G K K T K P S
pt032888_POPTR_    V L M L L A L F Y I F M Y L Y L R G I K R G S Q G L K H I S K S G Q K K R S -
 
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