fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027014 not found in 266aa AT5G63280.1 1st_1st 0.703056768 Ia
Pt032888 not found in 271aa AT5G40710.1 not_not 0.626637554 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G63280.1     MGRLWESLPVILLLL---VLLLHQSVSQGFEESESTRLVNEEVEVSNAPEIHCSRERSRA
pt027014_POPTR_ MGKA-ARITQILFLI---SLLSKQILSQDVGEHVAARTVKQ--EEGHAHKVHCSRERSRA
pt032888_POPTR_ MGLTRKQLTILFLCLCFTVFLQLTSVSSSTSPQGQKETASS--SFEHEKEVHCSRERSRA
                **     :. ::: :    :*    :*..       . ...  .  :  ::*********

AT5G63280.1     AWQIIQDYLTPFVERERYEIPKNCRLHPDNDLYRDQEHHKVHVDVFEWKCGYCKKSFNDE
pt027014_POPTR_ AWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEWKCGYCKKHFRAE
pt032888_POPTR_ AWKIIDEYLMPFVEKERYKISSRCRLHPENDLYRDQEQHKMHVDINEWRCGYCKKTFYEE
                **: *::** ****:*:*:*...*****.***:****.**:***: **:****** *  *

AT5G63280.1     KFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVLSSKKPKSKCNPPAVAKNRHLCESV
pt027014_POPTR_ KYLDQHFDNRHYNLLNISDGKCMADLCGALHCDFMMDSKSTKTKCNPAAVAKNHHLCESL
pt032888_POPTR_ KYLDKHFDNRHYDLLNVSHSKCLADVCGVLHCDLVLDSAPHKTKCNPAATGRNKHLCESL
                *:**:**..***:*** :. **:**:**.****:::.*   *:****.*..:*:*****:

AT5G63280.1     ANSCFPVSQGPSASRLHEHFLRQFCDAHTCTGNDKPFPRGGKKKSGVFYLAISILTLMLL
pt027014_POPTR_ ADSCFPLNQGPSASRLHELFLHQFCDAHTCSGNKKLFPKGGKKKTSVFYLAISILTMMMI
pt032888_POPTR_ ADSCFPVNEGTSALRLNEFFLRQFCDAHTCSGGRKPFSKGGKKETSTLYVIISVLVLMLL
                *:****:.:*.** **:* **:********:*. * *.:****::..:*: **:*.:*::

AT5G63280.1     PLFYLLVFLHQREKRSGTQDLRRIIKSGKKTKPS
pt027014_POPTR_ PLFYLIVYLHQSEMRKGTQELRRI--SKRKTKPS
pt032888_POPTR_ ALFYIFMYLYLRGIKRGSQGLKHISKSGQKKRS-
                .***::::*:    : *:* *::*  * :*.:.
BoxShade v3.31 C (beta, 970507) Output
AT5G63280.1     M G R L W E S L P V I L L L L - - - V L L L H Q S V S Q G F E E S E S T R L V N E E V E V S N A P E I H C S R E R S R A
pt027014_POPTR_    M G K A - A R I T Q I L F L I - - - S L L S K Q I L S Q D V G E H V A A R T V K Q - - E E G H A H K V H C S R E R S R A
pt032888_POPTR_    M G L T R K Q L T I L F L C L C F T V F L Q L T S V S S S T S P Q G Q K E T A S S - - S F E H E K E V H C S R E R S R A
 
AT5G63280.1     A W Q I I Q D Y L T P F V E R E R Y E I P K N C R L H P D N D L Y R D Q E H H K V H V D V F E W K C G Y C K K S F N D E
pt027014_POPTR_    A W Q A I E E Y L M P F V E R E Q Y Q I S S K C R L H P S N D L F R D Q E E H K I H V D I N E W K C G Y C K K H F R A E
pt032888_POPTR_    A W K I I D E Y L M P F V E K E R Y K I S S R C R L H P E N D L Y R D Q E Q H K M H V D I N E W R C G Y C K K T F Y E E
 
AT5G63280.1     K F L D K H F S T R H Y N L L N T T D T K C L A D L C G A L H C D F V L S S K K P K S K C N P P A V A K N R H L C E S V
pt027014_POPTR_    K Y L D Q H F D N R H Y N L L N I S D G K C M A D L C G A L H C D F M M D S K S T K T K C N P A A V A K N H H L C E S L
pt032888_POPTR_    K Y L D K H F D N R H Y D L L N V S H S K C L A D V C G V L H C D L V L D S A P H K T K C N P A A T G R N K H L C E S L
 
AT5G63280.1     A N S C F P V S Q G P S A S R L H E H F L R Q F C D A H T C T G N D K P F P R G G K K K S G V F Y L A I S I L T L M L L
pt027014_POPTR_    A D S C F P L N Q G P S A S R L H E L F L H Q F C D A H T C S G N K K L F P K G G K K K T S V F Y L A I S I L T M M M I
pt032888_POPTR_    A D S C F P V N E G T S A L R L N E F F L R Q F C D A H T C S G G R K P F S K G G K K E T S T L Y V I I S V L V L M L L
 
AT5G63280.1     P L F Y L L V F L H Q R E K R S G T Q D L R R I I K S G K K T K P S
pt027014_POPTR_    P L F Y L I V Y L H Q S E M R K G T Q E L R R I - - S K R K T K P S
pt032888_POPTR_    A L F Y I F M Y L Y L R G I K R G S Q G L K H I S K S G Q K K R S -
 
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