fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049063 not found in 268aa AT5G63280.1 1st_1st 0.641921397 Ia
Gm034844 not found in 282aa AT5G63280.1 not_1st 0.631004366 II
Gm023092 not found in 271aa AT5G63280.1 not_1st 0.624454148 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G63280.1     MGR--LWESLPVILLLLV---LLLHQSVS------QGFEESESTRLVNEEV--EVSNAPE
gm034844_Glyma1 MKKATRIVSIFVISMLCF--QELIHVSSSPFLYAHQVYEESSGGRNLKQEQEQEQKHAQE
gm023092_Glyma0 MKK--MWVSDHRLFLLCILCGLCFCLQFT------TGHAGSNAGRTLNQE-----GGDHQ
gm049063_Glyma1 -----MWLSDHRLFLLCIVCGLYFSLQFT------TGHADSNAGRTLNQE-----GGDHQ
                        *   : :* .     :  . :        .  *.. * :::*         :

AT5G63280.1     IHCSRERSRAAWQIIQDYLTPFVERERYEIPKNCRLHPDNDLYRDQEHHKVHVDVFEWKC
gm034844_Glyma1 VHCSRERSRAARKVIEEYLTPFMERENYQLSSKCKLHPENDIFTDQEEHKIYIDRHEWRC
gm023092_Glyma0 IHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCMLHPDNDIYRDQEQHKSHIDINEWQC
gm049063_Glyma1 IHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEQHKFHTDINEWQC
                :********:* ::*::** **:*:*.*.:...* ***:**:: ***.** : *  **:*

AT5G63280.1     GYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVLSSKKPKSKCNPPAV
gm034844_Glyma1 GYCKKSFREEKFLDQHFDSRHYNFLNLSHGKCLGDLCGALHCDAVMNFKSSRSKCNPAAA
gm023092_Glyma0 RYCKKSFYEEKHLDQHFDNRHSNLLNLSESQCLADVCGALHCDHEMNSGSKKSKCNPAAA
gm049063_Glyma1 GFCKKSFYEEKHLDQHFDNRHSNLLNLSESQCIADVCGALHCDHEMNSGSKKSKCNPAAA
                 :***** :**.**:**..** *:** :. :*:.*:*******  :.  . :*****.*.

AT5G63280.1     AKNRHLCESVANSCFPVSQGPSASRLHEHFLRQFCDAHTCTGNDKPFPRGGKKKSGVFYL
gm034844_Glyma1 ARNRHLCENLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFFRL
gm023092_Glyma0 AKHKHLCESLADSCFPVSDGPAASQLHEFFLHQFCDAHSCTGSRKPFSRGHRKKTNVFYI
gm049063_Glyma1 AKNKHLCESLADSCFPVTEGPAASRLHEFFLHQFCDAHSCTGNRKPFSRGRRKKTNVFYI
                *:::****.:*:.***:::**:*.:*** **:******:*:*. ***.** :.::..* :

AT5G63280.1     AISILTLMLLPLFYLLVFLHQREKRSGTQDLRRIIKSGKKTKPS
gm034844_Glyma1 AAGALILVLLPVFYLFLYLVQSDVKSRTQELRRISKAGWKSKPS
gm023092_Glyma0 FVSILLVILLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS
gm049063_Glyma1 FVSILLVILLLLYYLYIYLYQRGMKRETQVLKRVSQASRKKKPS
                  . * ::** ::** ::* *   :  ** *:*: ::. *.***
BoxShade v3.31 C (beta, 970507) Output
AT5G63280.1     M G R - - L W E S L P V I L L L L V - - - L L L H Q S V S - - - - - - Q G F E E S E S T R L V N E E V - - E V S N A P E
gm034844_Glyma1    M K K A T R I V S I F V I S M L C F - - Q E L I H V S S S P F L Y A H Q V Y E E S S G G R N L K Q E Q E Q E Q K H A Q E
gm023092_Glyma0    M K K - - M W V S D H R L F L L C I L C G L C F C L Q F T - - - - - - T G H A G S N A G R T L N Q E - - - - - G G D H Q
gm049063_Glyma1    - - - - - M W L S D H R L F L L C I V C G L Y F S L Q F T - - - - - - T G H A D S N A G R T L N Q E - - - - - G G D H Q
 
AT5G63280.1     I H C S R E R S R A A W Q I I Q D Y L T P F V E R E R Y E I P K N C R L H P D N D L Y R D Q E H H K V H V D V F E W K C
gm034844_Glyma1    V H C S R E R S R A A R K V I E E Y L T P F M E R E N Y Q L S S K C K L H P E N D I F T D Q E E H K I Y I D R H E W R C
gm023092_Glyma0    I H C S R E R S R T A W K I I Q E Y L M P F V E K E K Y H I S K R C M L H P D N D I Y R D Q E Q H K S H I D I N E W Q C
gm049063_Glyma1    I H C S R E R S R T A W K I I Q E Y L M P F V E K E K Y H I S K R C R L H P D N D I Y R D Q E Q H K F H T D I N E W Q C
 
AT5G63280.1     G Y C K K S F N D E K F L D K H F S T R H Y N L L N T T D T K C L A D L C G A L H C D F V L S S K K P K S K C N P P A V
gm034844_Glyma1    G Y C K K S F R E E K F L D Q H F D S R H Y N F L N L S H G K C L G D L C G A L H C D A V M N F K S S R S K C N P A A A
gm023092_Glyma0    R Y C K K S F Y E E K H L D Q H F D N R H S N L L N L S E S Q C L A D V C G A L H C D H E M N S G S K K S K C N P A A A
gm049063_Glyma1    G F C K K S F Y E E K H L D Q H F D N R H S N L L N L S E S Q C I A D V C G A L H C D H E M N S G S K K S K C N P A A A
 
AT5G63280.1     A K N R H L C E S V A N S C F P V S Q G P S A S R L H E H F L R Q F C D A H T C T G N D K P F P R G G K K K S G V F Y L
gm034844_Glyma1    A R N R H L C E N L A D N C F P I S E G P S A G R L H E L F L H Q F C D A H T C S G K H K P F S R G G K D Q S S F F R L
gm023092_Glyma0    A K H K H L C E S L A D S C F P V S D G P A A S Q L H E F F L H Q F C D A H S C T G S R K P F S R G H R K K T N V F Y I
gm049063_Glyma1    A K N K H L C E S L A D S C F P V T E G P A A S R L H E F F L H Q F C D A H S C T G N R K P F S R G R R K K T N V F Y I
 
AT5G63280.1     A I S I L T L M L L P L F Y L L V F L H Q R E K R S G T Q D L R R I I K S G K K T K P S
gm034844_Glyma1    A A G A L I L V L L P V F Y L F L Y L V Q S D V K S R T Q E L R R I S K A G W K S K P S
gm023092_Glyma0    F V S I L L V I L L L L Y Y L Y I Y L Y Q R G M K R E T Q V L K R I S Q A S R K K K P S
gm049063_Glyma1    F V S I L L V I L L L L Y Y L Y I Y L Y Q R G M K R E T Q V L K R V S Q A S R K K K P S
 
0