fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022933 not found in 237aa AT3G48590.1 1st_not 0.762254901 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G63470.1     MDNNNNNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMF
pt022933_POPTR_ MDNTNTNTNHQPQSTA-YPPHSTTTTPPPPPPGAPSS------APFHHLLQQQQQQLQMF
                ***.*.*.*:** .*: *** *:.**  ****...:*      *.:**************

AT5G63470.1     WTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRS
pt022933_POPTR_ WSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRS
                *:**********************************************************

AT5G63470.1     WLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAAS
pt022933_POPTR_ WLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKEE-----AAGLGGIVGATAS
                ************************************:*****     * * **:*..:**

AT5G63470.1     GVPYYYPPMGQP---AVPGGMMIGRPAMDP-SGVYAQPPSQAWQSVWQNSAGGGDDVSYG
pt022933_POPTR_ GVPYYYPPMGQPAAAAAAGGMMIGRPAVDPATGVYVQPPSQAWQSVWQTAA--AEDGSYG
                ************   *..*********:** :***.************.:*  .:* ***

AT5G63470.1     SGGSSGHGNLDSQG--
pt022933_POPTR_ SGGASG-----GQGET
                ***:**     .**
BoxShade v3.31 C (beta, 970507) Output
AT5G63470.1     M D N N N N N N N Q Q P P P T S V Y P P G S A V T T V I P P P P S G S A S I V T G G G A T Y H H L L Q Q Q Q Q Q L Q M F
pt022933_POPTR_    M D N T N T N T N H Q P Q S T A - Y P P H S T T T T P P P P P P G A P S S - - - - - - A P F H H L L Q Q Q Q Q Q L Q M F
 
AT5G63470.1     W T Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S
pt022933_POPTR_    W S Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S
 
AT5G63470.1     W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E E I K E E E D A A S A L G G G G M V A P A A S
pt022933_POPTR_    W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K E E - - - - - A A G L G G I V G A T A S
 
AT5G63470.1     G V P Y Y Y P P M G Q P - - - A V P G G M M I G R P A M D P - S G V Y A Q P P S Q A W Q S V W Q N S A G G G D D V S Y G
pt022933_POPTR_    G V P Y Y Y P P M G Q P A A A A A A G G M M I G R P A V D P A T G V Y V Q P P S Q A W Q S V W Q T A A - - A E D G S Y G
 
AT5G63470.1     S G G S S G H G N L D S Q G - -
pt022933_POPTR_    S G G A S G - - - - - G Q G E T
 
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