fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012186 not found in 246aa AT5G63470.2 1st_not 0.541666666 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G63470.1     MDNNNNNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGG--GATYHHLLQQQQQQLQ
Os012186_Os03t0 MDN-------QQLPYAGQPAAAGAGAPVPGVPGA------GGPPAVPHHHLLQQQQAQLQ
                ***       *  * :  *..:.. : :*  *..      **  ...:******** ***

AT5G63470.1     MFWTYQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILEL
Os012186_Os03t0 AFWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILEL
                 **:***** *:  ..******************************:*************

AT5G63470.1     TIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALG---GG-
Os012186_Os03t0 TIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAKEE--PGSALGFAAGGP
                *****************:**:****:***:************ ***  ..****   ** 

AT5G63470.1     ----GMVAPAASGVPYYYPPMGQPAVPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAG
Os012186_Os03t0 AGAVGAAGPAA-GLPYYYPPMGQPA---------PMM-PA--WHVP---AWDPAWQQ--G
                    * ..*** *:***********         * * *:  :  *   **:..**:  *

AT5G63470.1     GGDDVSYGSGGS---------SGHGNLDSQG--------
Os012186_Os03t0 AAPDVDQGAAGSFSEEGQQGFAGHGGAAASFPPAPPSSE
                .. **. *:.**         :***.  :.
BoxShade v3.31 C (beta, 970507) Output
AT5G63470.1     M D N N N N N N N Q Q P P P T S V Y P P G S A V T T V I P P P P S G S A S I V T G G - - G A T Y H H L L Q Q Q Q Q Q L Q
Os012186_Os03t0    M D N - - - - - - - Q Q L P Y A G Q P A A A G A G A P V P G V P G A - - - - - - G G P P A V P H H H L L Q Q Q Q A Q L Q
 
AT5G63470.1     M F W T Y Q R Q E I E Q - - V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L
Os012186_Os03t0    A F W A Y Q R Q E A E R A S A S D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P V L F A K A C E L F I L E L
 
AT5G63470.1     T I R S W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E E I K E E E D A A S A L G - - - G G -
Os012186_Os03t0    T I R S W L H A E E N K R R T L Q R N D V A A A I A R T D V F D F L V D I V P R E E A K E E - - P G S A L G F A A G G P
 
AT5G63470.1     - - - - G M V A P A A S G V P Y Y Y P P M G Q P A V P G G M M I G R P A M D P S G V Y A Q P P S Q A W Q S V W Q N S A G
Os012186_Os03t0    A G A V G A A G P A A - G L P Y Y Y P P M G Q P A - - - - - - - - - P M M - P A - - W H V P - - - A W D P A W Q Q - - G
 
AT5G63470.1     G G D D V S Y G S G G S - - - - - - - - - S G H G N L D S Q G - - - - - - - -
Os012186_Os03t0    A A P D V D Q G A A G S F S E E G Q Q G F A G H G G A A A S F P P A P P S S E
 
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