fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G63470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010283 not found in 222aa AT3G48590.1 1st_not 0.686274509 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G63470.1     MDNNNNNNNQ-QPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGAT-YHHLLQQQQQQLQ
gm010283_Glyma0 MENNQQQGAQAQSGP---YPGGAG----------GSAGAGAGAGAAPFQHLLQQQQQQLQ
                *:**:::. * *. *   ** *:.          ***.  :*.**: ::***********

AT5G63470.1     MFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
gm010283_Glyma0 MFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTI
                ***:*******:************************************************

AT5G63470.1     RSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPA
gm010283_Glyma0 RSWLHADENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK--DDAA-------LVGAT
                ******:*******************************:***  :***       :*..:

AT5G63470.1     ASGVPYYYPPMGQPAVPGGMMIGRPAMDP-SGVYAQPPSQAWQSVWQNSAGGGDDVSYGS
gm010283_Glyma0 ASGVPYYYPPIGQPA---GMMIGRPAVDPATGVYVQPPSQAWQSVWQSAA---EDTPYGT
                **********:****   ********:** :***.************.:*   :*..**:

AT5G63470.1     GGSSGHGNLDSQG
gm010283_Glyma0 G---AQGNLDGQS
                *   .:****.*.
BoxShade v3.31 C (beta, 970507) Output
AT5G63470.1     M D N N N N N N N Q - Q P P P T S V Y P P G S A V T T V I P P P P S G S A S I V T G G G A T - Y H H L L Q Q Q Q Q Q L Q
gm010283_Glyma0    M E N N Q Q Q G A Q A Q S G P - - - Y P G G A G - - - - - - - - - - G S A G A G A G A G A A P F Q H L L Q Q Q Q Q Q L Q
 
AT5G63470.1     M F W T Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I
gm010283_Glyma0    M F W S Y Q R Q E I E H V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I
 
AT5G63470.1     R S W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E E I K E E E D A A S A L G G G G M V A P A
gm010283_Glyma0    R S W L H A D E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K - - D D A A - - - - - - - L V G A T
 
AT5G63470.1     A S G V P Y Y Y P P M G Q P A V P G G M M I G R P A M D P - S G V Y A Q P P S Q A W Q S V W Q N S A G G G D D V S Y G S
gm010283_Glyma0    A S G V P Y Y Y P P I G Q P A - - - G M M I G R P A V D P A T G V Y V Q P P S Q A W Q S V W Q S A A - - - E D T P Y G T
 
AT5G63470.1     G G S S G H G N L D S Q G
gm010283_Glyma0    G - - - A Q G N L D G Q S
 
0