fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G64530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010267 not found in 192aa AT5G64530.1 1st_1st 0.673972602 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G64530.1     --MNLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQ
pt010267_POPTR_ MAANLPPGFRFCPSDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELDGKALSEGKQ
                   ******** *:*************:*************** ****:* ****.**:*

AT5G64530.1     WYFYSRKTQERVTSNGYWGSM--GMDEPIYTSSTHKKVGIKKYLTFYLGDS-QTNWIMQE
pt010267_POPTR_ CYFYSRRTQNRITNNGCWKPMVGHVEEPILASENNKLVGIKKYFIFYAAEGIKTNWIMEE
                 *****:**:*:*.** * .*   ::*** :*..:* ******: ** .:. :*****:*

AT5G64530.1     YSLPD-----SSSSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSC
pt010267_POPTR_ YLLSEHRTSHDSSPSTKSSKTRARS-----KQDYSKWVICRVYERS-YEEEEDGGKELSC
                * *.:     .**.*::***  :*:     * ************:.  ***:*.*.****

AT5G64530.1     LDEVFLSLDDLDEVSLP-
pt010267_POPTR_ LDEVFLSLEDLDEISLPN
                ********:****:***
BoxShade v3.31 C (beta, 970507) Output
AT5G64530.1     - - M N L P P G F R F F P T D E E L V V H F L H R K A S L L P C H P D V I P D L D L Y H Y D P W D L P G K A L G E G R Q
pt010267_POPTR_    M A A N L P P G F R F C P S D E E L V V H F L H R K A A L L P C H P D V I P D L D L Y P Y D P W E L D G K A L S E G K Q
 
AT5G64530.1     W Y F Y S R K T Q E R V T S N G Y W G S M - - G M D E P I Y T S S T H K K V G I K K Y L T F Y L G D S - Q T N W I M Q E
pt010267_POPTR_    C Y F Y S R R T Q N R I T N N G C W K P M V G H V E E P I L A S E N N K L V G I K K Y F I F Y A A E G I K T N W I M E E
 
AT5G64530.1     Y S L P D - - - - - S S S S S S R S S K R S S R A S S S S H K P D Y S K W V I C R V Y E Q N C S E E E D D D G T E L S C
pt010267_POPTR_    Y L L S E H R T S H D S S P S T K S S K T R A R S - - - - - K Q D Y S K W V I C R V Y E R S - Y E E E E D G G K E L S C
 
AT5G64530.1     L D E V F L S L D D L D E V S L P -
pt010267_POPTR_    L D E V F L S L E D L D E I S L P N
 
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