fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G64530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010523 not found in 213aa AT5G64530.1 1st_1st 0.482191780 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G64530.1     ----MNLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDL-------P
Sb010523_Sorbi1 MGGATNLPPGFHFFPSDEDLIVHFLRRKVANLPCRPDIVPTILLHRYDPWELNGLHYSQP
                     ******:***:**:*:****:**.: ***:**::* : *::****:*       *

AT5G64530.1     --------GKALGEGRQWYFYSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLT
Sb010523_Sorbi1 SLYLLYMHGTALQAGNQWYFFSHAAQSRTSPNGYWNPVGADETVTSSGC--IVGLKKTLI
                        *.**  *.****:*: :*.*.:.****..:* **.: :*.    **:** * 

AT5G64530.1     FYLGDS----QTNWIMQEYSLPD-----------SSSSSSRSSKRSSRASSSSHKPDYSK
Sb010523_Sorbi1 FCTGEPFKGFKTNWIMHEYHLQDGGYNVSGSSTSSSSSSSRKSQRKRLHSST----ESNN
                *  *:.    :*****:** * *           *******.*:*.   **:    : .:

AT5G64530.1     WVICRVYEQNCSEEED--DDGTELSCLDEVFLSLDDLDEVSLP
Sb010523_Sorbi1 WVICRVFESSCGSQVSFHDEGTELSCLDEVFLSLDDYDE----
                ******:*..*..: .  *:**************** **
BoxShade v3.31 C (beta, 970507) Output
AT5G64530.1     - - - - M N L P P G F R F F P T D E E L V V H F L H R K A S L L P C H P D V I P D L D L Y H Y D P W D L - - - - - - - P
Sb010523_Sorbi1    M G G A T N L P P G F H F F P S D E D L I V H F L R R K V A N L P C R P D I V P T I L L H R Y D P W E L N G L H Y S Q P
 
AT5G64530.1     - - - - - - - - G K A L G E G R Q W Y F Y S R K T Q E R V T S N G Y W G S M G M D E P I Y T S S T H K K V G I K K Y L T
Sb010523_Sorbi1    S L Y L L Y M H G T A L Q A G N Q W Y F F S H A A Q S R T S P N G Y W N P V G A D E T V T S S G C - - I V G L K K T L I
 
AT5G64530.1     F Y L G D S - - - - Q T N W I M Q E Y S L P D - - - - - - - - - - - S S S S S S R S S K R S S R A S S S S H K P D Y S K
Sb010523_Sorbi1    F C T G E P F K G F K T N W I M H E Y H L Q D G G Y N V S G S S T S S S S S S S R K S Q R K R L H S S T - - - - E S N N
 
AT5G64530.1     W V I C R V Y E Q N C S E E E D - - D D G T E L S C L D E V F L S L D D L D E V S L P
Sb010523_Sorbi1    W V I C R V F E S S C G S Q V S F H D E G T E L S C L D E V F L S L D D Y D E - - - -
 
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